Variant report

Variant	rs11727285
Chromosome Location	chr4:30783295-30783296
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10006361	0.98[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10008728	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10021424	0.89[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs10024115	0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs1032175	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs10939312	0.87[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs13121800	0.87[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs1348921	0.98[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1447360	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1447364	0.97[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1486787	0.87[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs28716204	0.89[ASN][1000 genomes]
rs35428738	0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs4235010	0.86[ASN][1000 genomes]
rs4368569	0.86[ASN][1000 genomes]
rs4380480	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4466008	0.85[ASN][1000 genomes]
rs4498103	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs4504214	0.80[AMR][1000 genomes]
rs4505780	0.87[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs4557224	0.86[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs4611883	0.86[ASN][1000 genomes]
rs4613528	0.94[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs4615135	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs4995324	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6448719	0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs6448720	0.87[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs6448723	0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6814666	0.84[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs6815007	0.87[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs6827723	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs6828872	0.87[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6832173	0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs6855232	0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs6855570	0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs6856144	0.98[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6858230	0.87[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs7654583	0.80[AMR][1000 genomes]
rs7664926	0.87[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7670155	0.94[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7685283	0.98[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7685566	0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7695188	0.84[AMR][1000 genomes]
rs7695488	0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs9291549	0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs9291553	0.85[ASN][1000 genomes]
rs9999290	0.98[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30771200-30789400	Weak transcription	Fetal Muscle Trunk	muscle
2	chr4:30779000-30785000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr4:30779200-30785000	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr4:30779200-30787800	Weak transcription	Rectal Smooth Muscle	rectum
5	chr4:30779200-30790600	Weak transcription	Fetal Lung	lung
6	chr4:30781600-30785200	Weak transcription	Colon Smooth Muscle	Colon
7	chr4:30782800-30784400	Weak transcription	Aorta	Aorta

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