Variant report

Variant	rs4466008
Chromosome Location	chr4:30814956-30814957
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 66 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:66)

rs_ID	r²[population]
rs10006361	0.95[CHB][hapmap];0.95[JPT][hapmap];0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10008728	0.80[CEU][hapmap];0.94[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs10021424	0.86[ASN][1000 genomes]
rs10024115	0.95[CHB][hapmap];0.88[CHD][hapmap];0.95[JPT][hapmap];0.80[TSI][hapmap];0.88[ASN][1000 genomes]
rs1032175	0.85[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs10517219	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10939312	0.87[ASN][1000 genomes]
rs11727285	0.85[ASN][1000 genomes]
rs12331633	0.82[CEU][hapmap];0.91[CHB][hapmap];0.88[GIH][hapmap];0.85[JPT][hapmap];0.87[MEX][hapmap];0.85[TSI][hapmap];0.82[AMR][1000 genomes]
rs13108018	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13121800	0.81[ASN][1000 genomes]
rs13138590	1.00[YRI][hapmap]
rs1348921	0.95[CHB][hapmap];0.95[CHD][hapmap];0.80[GIH][hapmap];0.95[JPT][hapmap];0.85[TSI][hapmap];0.91[ASN][1000 genomes]
rs1374658	0.84[AMR][1000 genomes]
rs1447360	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1447364	0.91[CHB][hapmap];0.95[JPT][hapmap];0.91[ASN][1000 genomes]
rs1486787	0.95[CHB][hapmap];0.95[JPT][hapmap];0.80[TSI][hapmap];0.81[ASN][1000 genomes]
rs2871476	1.00[YRI][hapmap]
rs28716204	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35428738	0.87[ASN][1000 genomes]
rs3775331	1.00[YRI][hapmap]
rs4235010	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4358358	1.00[YRI][hapmap]
rs4361347	1.00[YRI][hapmap]
rs4368569	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4380480	0.91[CHB][hapmap];0.91[CHD][hapmap];0.80[GIH][hapmap];0.95[JPT][hapmap];0.87[TSI][hapmap];0.90[ASN][1000 genomes]
rs4487300	1.00[YRI][hapmap]
rs4498103	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4504214	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4505780	0.91[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs4557224	0.85[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.97[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4585258	1.00[YRI][hapmap]
rs4611883	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4613528	0.88[ASN][1000 genomes]
rs4615135	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4619848	0.82[CEU][hapmap];0.91[CHB][hapmap];0.88[GIH][hapmap];0.96[MEX][hapmap];0.89[TSI][hapmap];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4692105	0.91[CHB][hapmap];0.81[JPT][hapmap]
rs4692490	1.00[YRI][hapmap]
rs4995324	0.87[ASN][1000 genomes]
rs6448720	0.80[ASN][1000 genomes]
rs6448723	0.95[CHB][hapmap];0.90[CHD][hapmap];0.95[JPT][hapmap];0.80[TSI][hapmap];0.87[ASN][1000 genomes]
rs6812005	1.00[ASW][hapmap];0.85[CEU][hapmap];0.95[GIH][hapmap];1.00[LWK][hapmap];0.80[MEX][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6814666	0.81[ASN][1000 genomes]
rs6815007	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs6822350	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6827723	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6828872	0.91[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs6832173	0.88[ASN][1000 genomes]
rs6847642	1.00[YRI][hapmap]
rs6855232	0.88[ASN][1000 genomes]
rs6855570	0.88[ASN][1000 genomes]
rs6856144	0.88[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs6858230	0.87[ASN][1000 genomes]
rs7654583	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7664926	0.88[ASN][1000 genomes]
rs7670155	0.95[CHB][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs7678055	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7685283	0.90[ASN][1000 genomes]
rs7692210	0.81[CEU][hapmap];0.90[CHB][hapmap];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7695488	0.95[CHB][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs9291547	1.00[ASW][hapmap]
rs9291549	0.91[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs9291553	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9685207	1.00[YRI][hapmap]
rs9997529	1.00[YRI][hapmap]
rs9999290	0.95[CHB][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30795800-30824000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:30803800-30817200	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr4:30804800-30819400	Weak transcription	Aorta	Aorta
4	chr4:30811400-30819000	Weak transcription	Fetal Heart	heart
5	chr4:30811600-30817200	Weak transcription	Fetal Lung	lung
6	chr4:30813800-30835800	Weak transcription	Colon Smooth Muscle	Colon
7	chr4:30814600-30815000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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