Variant report

Variant	rs6827723
Chromosome Location	chr4:30801797-30801798
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10006361	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10008728	0.91[ASN][1000 genomes]
rs10021424	0.87[ASN][1000 genomes]
rs10024115	0.89[ASN][1000 genomes]
rs1032175	0.82[ASN][1000 genomes]
rs10517219	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10939312	0.89[ASN][1000 genomes]
rs11727285	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs13108018	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13121800	0.82[ASN][1000 genomes]
rs1348921	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1447360	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1447364	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1486787	0.82[ASN][1000 genomes]
rs28716204	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35428738	0.88[ASN][1000 genomes]
rs4235010	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4368569	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4380480	0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4466008	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4498103	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4504214	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4505780	0.89[ASN][1000 genomes]
rs4557224	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4611883	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4613528	0.89[ASN][1000 genomes]
rs4615135	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4619848	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4995324	0.89[ASN][1000 genomes]
rs6448719	0.81[ASN][1000 genomes]
rs6448720	0.82[ASN][1000 genomes]
rs6448723	0.89[ASN][1000 genomes]
rs6812005	0.89[EUR][1000 genomes]
rs6814666	0.83[ASN][1000 genomes]
rs6815007	0.81[ASN][1000 genomes]
rs6822350	0.90[EUR][1000 genomes]
rs6828872	0.89[ASN][1000 genomes]
rs6832173	0.89[ASN][1000 genomes]
rs6855232	0.89[ASN][1000 genomes]
rs6855570	0.89[ASN][1000 genomes]
rs6856144	0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs6858230	0.89[ASN][1000 genomes]
rs7654583	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7664926	0.89[ASN][1000 genomes]
rs7670155	0.89[ASN][1000 genomes]
rs7678055	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7685283	0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7685566	0.81[ASN][1000 genomes]
rs7692210	0.81[EUR][1000 genomes]
rs7695488	0.89[ASN][1000 genomes]
rs9291549	0.89[ASN][1000 genomes]
rs9291553	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9999290	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30791200-30804400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr4:30791400-30802400	Weak transcription	Aorta	Aorta
3	chr4:30791400-30802600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr4:30791600-30809800	Weak transcription	Fetal Lung	lung
5	chr4:30794600-30803800	Weak transcription	HSMMtube	muscle
6	chr4:30794600-30805000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr4:30795800-30824000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr4:30796000-30810400	Weak transcription	Fetal Heart	heart
9	chr4:30796200-30803400	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr4:30796200-30804200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr4:30801200-30803200	Weak transcription	NHEK	skin
12	chr4:30801200-30809600	Weak transcription	Fetal Stomach	stomach

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