Variant report

Variant	rs11816664
Chromosome Location	chr10:26338869-26338870
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 188 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:187)

rs_ID	r²[population]
rs10508713	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11014866	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11014874	0.95[EUR][1000 genomes]
rs11812152	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11812332	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11812335	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11812370	0.83[AMR][1000 genomes]
rs11812543	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11812786	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11812816	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11812817	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11812818	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11813672	0.94[EUR][1000 genomes]
rs11813728	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11813730	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11816237	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11816333	1.00[ASN][1000 genomes]
rs11816461	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11817896	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11818587	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11818765	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11818977	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11819096	1.00[ASN][1000 genomes]
rs11819181	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11819262	0.93[EUR][1000 genomes]
rs11819744	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1521037	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1521038	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1591907	1.00[ASN][1000 genomes]
rs16926590	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16926628	0.83[AMR][1000 genomes]
rs16926660	0.82[AMR][1000 genomes]
rs17666095	1.00[ASN][1000 genomes]
rs17666132	1.00[ASN][1000 genomes]
rs17666138	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17666263	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17666893	0.96[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17667157	0.92[AMR][1000 genomes]
rs17738738	1.00[ASN][1000 genomes]
rs17738768	1.00[ASN][1000 genomes]
rs17738883	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17738907	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17738937	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17738949	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17739436	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17739453	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17739680	0.96[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2222351	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2368119	1.00[ASN][1000 genomes]
rs34028452	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs34044028	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs34233278	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs34508968	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs35434254	1.00[ASN][1000 genomes]
rs35910926	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs36015296	1.00[ASN][1000 genomes]
rs3897758	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41279908	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41454449	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4370835	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55839812	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs55841525	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs55852999	1.00[ASN][1000 genomes]
rs55947731	0.83[AFR][1000 genomes]
rs56093148	0.86[AFR][1000 genomes]
rs56153367	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs56234810	0.96[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs56278522	0.86[AFR][1000 genomes]
rs56284120	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs56352608	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs56387846	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs57140603	0.82[AMR][1000 genomes]
rs57328269	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs57347362	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs57681362	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs57687518	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58129501	0.86[AFR][1000 genomes]
rs58231370	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs58309865	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs58552357	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs59085026	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs59646929	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59914029	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs60489830	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs60781504	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61112806	0.83[AFR][1000 genomes]
rs61247361	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61284099	0.96[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs61520006	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6650135	0.83[AMR][1000 genomes]
rs7070437	0.95[EUR][1000 genomes]
rs7074143	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7082557	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72787349	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72787350	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72789947	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72789949	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72789954	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72789957	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72789960	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72791165	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72791168	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793209	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72793210	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72793214	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72793215	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72793218	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72793939	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72793940	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72793941	1.00[ASN][1000 genomes]
rs72793942	1.00[ASN][1000 genomes]
rs72793944	1.00[ASN][1000 genomes]
rs72793945	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72793946	1.00[ASN][1000 genomes]
rs72793947	1.00[ASN][1000 genomes]
rs72793948	1.00[ASN][1000 genomes]
rs72793949	1.00[ASN][1000 genomes]
rs72793950	1.00[ASN][1000 genomes]
rs72793951	1.00[ASN][1000 genomes]
rs72793953	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793954	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793955	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793956	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793957	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793958	1.00[ASN][1000 genomes]
rs72793960	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793962	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793963	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793964	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793966	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793968	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793970	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793972	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793973	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793974	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793975	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793976	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793977	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793978	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793979	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793981	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793982	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793983	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793985	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793986	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793990	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793991	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793992	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72793994	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72793999	1.00[ASN][1000 genomes]
rs72795808	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795809	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795811	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795813	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795815	0.86[AFR][1000 genomes]
rs72795817	1.00[ASN][1000 genomes]
rs72795819	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795820	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795825	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795826	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795833	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795834	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795835	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795838	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795840	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795845	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795846	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795848	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72795849	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72797856	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs74126331	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs74126361	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74126374	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs74126386	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74126397	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74126400	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74126401	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74126402	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74129103	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74129107	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs74129109	0.96[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs74129112	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs74129113	0.96[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7476089	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7894269	0.83[AMR][1000 genomes]
rs7909349	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7919609	0.96[AMR][1000 genomes];0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1792417	chr10:26263695-26395038	Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26334200-26342600	Weak transcription	Aorta	Aorta
2	chr10:26338200-26341200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr10:26338400-26340800	Weak transcription	Pancreatic Islets	Pancreatic Islet

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