The 2.0 version of rSNPBase

Variant report

Variant rs11823865
Chromosome Location chr11:9637932-9637933
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:9635400-9646400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr11:9636200-9639400 Enhancers HSMMtube muscle
3 chr11:9636200-9640000 Enhancers HSMM muscle
4 chr11:9636200-9640200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
5 chr11:9636400-9647400 Weak transcription Right Atrium heart
6 chr11:9636600-9638600 Enhancers Primary hematopoietic stem cells blood
7 chr11:9636600-9639400 Weak transcription NHEK skin
8 chr11:9636600-9640200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
9 chr11:9636600-9640200 Weak transcription Stomach Smooth Muscle stomach
10 chr11:9636600-9640200 Enhancers NHDF-Ad bronchial
11 chr11:9636600-9642200 Enhancers Primary B cells from peripheral blood blood
12 chr11:9636800-9638200 Enhancers ES-I3 Cell Line embryonic stem cell
13 chr11:9636800-9638200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr11:9636800-9638400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr11:9636800-9638800 Enhancers HUVEC blood vessel
16 chr11:9636800-9639400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr11:9636800-9639600 Weak transcription Fetal Muscle Leg muscle
18 chr11:9636800-9639600 Weak transcription Placenta Amnion Placenta Amnion
19 chr11:9636800-9639800 Weak transcription NH-A brain
20 chr11:9636800-9640000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr11:9636800-9640200 Enhancers Osteobl bone
22 chr11:9636800-9641200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr11:9637000-9638000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr11:9637000-9638200 Weak transcription Placenta Placenta
25 chr11:9637000-9638200 Weak transcription Fetal Thymus thymus
26 chr11:9637000-9638600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr11:9637000-9638600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr11:9637000-9638600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr11:9637000-9639200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr11:9637000-9639400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr11:9637000-9639400 Weak transcription K562 blood
32 chr11:9637000-9640200 Enhancers Hela-S3 cervix
33 chr11:9637000-9641200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr11:9637000-9641200 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr11:9637000-9641400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr11:9637000-9641600 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr11:9637000-9646800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr11:9637200-9638000 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr11:9637200-9638200 Weak transcription Muscle Satellite Cultured Cells --
40 chr11:9637200-9638600 Enhancers Primary hematopoietic stem cells short term culture blood
41 chr11:9637200-9644600 Weak transcription Primary monocytes fromperipheralblood blood
42 chr11:9637400-9638400 Weak transcription NHLF lung
43 chr11:9637400-9638800 Enhancers Spleen Spleen
44 chr11:9637400-9638800 Enhancers GM12878-XiMat blood
45 chr11:9637600-9638000 Flanking Active TSS Primary B cells from cord blood blood
46 chr11:9637800-9638000 Enhancers Primary T cells from cord blood blood
47 chr11:9637800-9638000 Enhancers Fetal Kidney kidney

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Last update: Aug 31, 2015