Variant report

Variant rs11952675
Chromosome Location chr5:146883704-146883705
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146871400-146886400 Weak transcription H1 Cell Line embryonic stem cell
2 chr5:146871600-146887200 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr5:146873200-146887400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr5:146878800-146887200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr5:146879800-146887000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr5:146882000-146886600 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr5:146882400-146885200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr5:146882600-146884000 Enhancers Fetal Stomach stomach
9 chr5:146882600-146884400 Enhancers NHLF lung
10 chr5:146882800-146883800 Enhancers Brain Germinal Matrix brain
11 chr5:146882800-146884200 Enhancers Adipose Nuclei Adipose
12 chr5:146882800-146884200 Enhancers Fetal Muscle Leg muscle
13 chr5:146882800-146884800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr5:146882800-146887000 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr5:146882800-146887200 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr5:146883000-146883800 Enhancers Psoas Muscle Psoas
17 chr5:146883000-146884000 Enhancers Ovary ovary
18 chr5:146883000-146884200 Enhancers Rectal Smooth Muscle rectum
19 chr5:146883000-146884800 Enhancers Osteobl bone
20 chr5:146883000-146885000 Enhancers Stomach Smooth Muscle stomach
21 chr5:146883000-146886400 Enhancers Colon Smooth Muscle Colon
22 chr5:146883200-146883800 Enhancers Duodenum Smooth Muscle Duodenum
23 chr5:146883200-146883800 Enhancers HUVEC blood vessel
24 chr5:146883200-146884400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr5:146883200-146884400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr5:146883200-146884400 Enhancers Fetal Lung lung
27 chr5:146883200-146884400 Enhancers NHDF-Ad bronchial
28 chr5:146883200-146885000 Enhancers NH-A brain
29 chr5:146883200-146887000 Weak transcription Fetal Muscle Trunk muscle
30 chr5:146883400-146883800 Enhancers Skeletal Muscle Female skeletal muscle
31 chr5:146883400-146883800 Enhancers HSMMtube muscle
32 chr5:146883400-146884000 Enhancers HSMM muscle
33 chr5:146883400-146884200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr5:146883400-146884400 Enhancers Muscle Satellite Cultured Cells --
35 chr5:146883400-146886400 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr5:146883600-146884000 Enhancers ES-I3 Cell Line embryonic stem cell
37 chr5:146883600-146884000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr5:146883600-146884000 Enhancers Skeletal Muscle Male skeletal muscle
39 chr5:146883600-146884200 Enhancers Aorta Aorta
40 chr5:146883600-146884400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr5:146883600-146884400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr5:146883600-146884400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
43 chr5:146883600-146886400 Weak transcription HUES64 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links