Variant report

Variant	rs7736889
Chromosome Location	chr5:146867587-146867588
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:146864988..146868068-chr5:146868350..146871206,3	K562	blood:

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:54)

rs_ID	r²[population]
rs10038789	1.00[EUR][1000 genomes]
rs10039022	1.00[EUR][1000 genomes]
rs10040153	1.00[EUR][1000 genomes]
rs10044473	1.00[EUR][1000 genomes]
rs11950383	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11950394	1.00[MEX][hapmap];1.00[EUR][1000 genomes]
rs11952675	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11953018	1.00[MEX][hapmap]
rs11956835	1.00[MEX][hapmap]
rs11960473	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13187867	1.00[EUR][1000 genomes]
rs1432848	1.00[EUR][1000 genomes]
rs17106454	1.00[MEX][hapmap]
rs17106942	1.00[EUR][1000 genomes]
rs17106958	1.00[EUR][1000 genomes]
rs17107047	1.00[EUR][1000 genomes]
rs1864963	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1897560	1.00[EUR][1000 genomes]
rs4705178	1.00[EUR][1000 genomes]
rs4705182	1.00[EUR][1000 genomes]
rs4705183	1.00[EUR][1000 genomes]
rs57435233	1.00[EUR][1000 genomes]
rs58633172	1.00[EUR][1000 genomes]
rs59481656	1.00[EUR][1000 genomes]
rs6580469	1.00[EUR][1000 genomes]
rs6580484	1.00[EUR][1000 genomes]
rs6580487	1.00[EUR][1000 genomes]
rs6580488	1.00[EUR][1000 genomes]
rs6580490	1.00[EUR][1000 genomes]
rs6859847	1.00[EUR][1000 genomes]
rs6861316	1.00[EUR][1000 genomes]
rs6880281	1.00[EUR][1000 genomes]
rs6883497	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73268106	1.00[EUR][1000 genomes]
rs73268113	1.00[EUR][1000 genomes]
rs73268120	1.00[EUR][1000 genomes]
rs73268145	1.00[EUR][1000 genomes]
rs73270115	1.00[EUR][1000 genomes]
rs73270116	1.00[EUR][1000 genomes]
rs73270118	1.00[EUR][1000 genomes]
rs73270121	1.00[EUR][1000 genomes]
rs73270124	1.00[EUR][1000 genomes]
rs7443883	1.00[EUR][1000 genomes]
rs7446754	1.00[EUR][1000 genomes]
rs7447099	1.00[EUR][1000 genomes]
rs7447317	1.00[EUR][1000 genomes]
rs7700567	1.00[EUR][1000 genomes]
rs7709473	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7710371	1.00[EUR][1000 genomes]
rs7715897	1.00[EUR][1000 genomes]
rs7720075	1.00[MEX][hapmap]
rs7720384	1.00[MEX][hapmap]
rs7734698	1.00[EUR][1000 genomes]
rs9325046	1.00[EUR][1000 genomes]

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:146851800-146883000	Weak transcription	Psoas Muscle	Psoas
2	chr5:146860200-146867800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr5:146861600-146867800	Weak transcription	Spleen	Spleen
4	chr5:146864600-146869600	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr5:146864600-146870200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr5:146864600-146883000	Weak transcription	Stomach Smooth Muscle	stomach
7	chr5:146864800-146870400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr5:146865200-146882600	Weak transcription	Fetal Stomach	stomach
9	chr5:146865400-146870600	Weak transcription	Osteobl	bone
10	chr5:146865600-146870000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr5:146866000-146867600	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr5:146866000-146868000	Enhancers	HUES6 Cell Line	embryonic stem cell
13	chr5:146866200-146867800	Enhancers	Rectal Smooth Muscle	rectum
14	chr5:146866200-146868000	Enhancers	ES-I3 Cell Line	embryonic stem cell
15	chr5:146866200-146868000	Enhancers	H9 Cell Line	embryonic stem cell
16	chr5:146866200-146868000	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr5:146866200-146868000	Enhancers	iPS-20b Cell Line	embryonic stem cell
18	chr5:146866400-146867600	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr5:146866400-146867600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr5:146866400-146867800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
21	chr5:146866600-146870200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
22	chr5:146866600-146870200	Weak transcription	Adipose Nuclei	Adipose
23	chr5:146866800-146870000	Weak transcription	Colon Smooth Muscle	Colon
24	chr5:146866800-146882600	Weak transcription	NHLF	lung
25	chr5:146866800-146883000	Weak transcription	Ovary	ovary
26	chr5:146867000-146868000	Enhancers	HUES64 Cell Line	embryonic stem cell
27	chr5:146867000-146870200	Weak transcription	H1 Cell Line	embryonic stem cell
28	chr5:146867000-146870200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
29	chr5:146867000-146870600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr5:146867200-146868200	Enhancers	HUVEC	blood vessel
31	chr5:146867200-146869600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr5:146867400-146868800	Genic enhancers	Fetal Muscle Leg	muscle

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