Variant report

Variant rs6580469
Chromosome Location chr5:146914782-146914783
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146911600-146917800 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr5:146912000-146915200 Weak transcription Colon Smooth Muscle Colon
3 chr5:146912200-146915400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr5:146912400-146915600 Weak transcription Rectal Smooth Muscle rectum
5 chr5:146912400-146917600 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr5:146913200-146916400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr5:146913200-146916800 Enhancers NHLF lung
8 chr5:146913200-146917000 Enhancers NH-A brain
9 chr5:146913600-146916800 Enhancers Osteobl bone
10 chr5:146913800-146915000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
11 chr5:146913800-146915000 Enhancers Ovary ovary
12 chr5:146913800-146915000 Enhancers NHDF-Ad bronchial
13 chr5:146913800-146915800 Enhancers HMEC breast
14 chr5:146913800-146915800 Enhancers NHEK skin
15 chr5:146913800-146916000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr5:146914000-146915800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr5:146914000-146917000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr5:146914000-146918600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr5:146914200-146915000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr5:146914200-146915800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr5:146914200-146916000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr5:146914200-146916400 Enhancers Muscle Satellite Cultured Cells --
23 chr5:146914200-146916800 Enhancers HUVEC blood vessel
24 chr5:146914400-146915200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr5:146914400-146915800 Enhancers HSMM muscle
26 chr5:146914600-146915000 Enhancers Fetal Muscle Trunk muscle
27 chr5:146914600-146915400 Enhancers Fetal Brain Male brain
28 chr5:146914600-146915600 Enhancers Stomach Mucosa stomach

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