Variant report

Variant rs6580487
Chromosome Location chr5:146985107-146985108
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146957000-146996200 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr5:146957800-147038000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr5:146967400-146990400 Weak transcription Fetal Brain Male brain
4 chr5:146969600-146989800 Weak transcription Brain Cingulate Gyrus brain
5 chr5:146970600-146993000 Weak transcription Brain Angular Gyrus brain
6 chr5:146971200-146990000 Weak transcription Brain Anterior Caudate brain
7 chr5:146971200-146990800 Weak transcription Thymus Thymus
8 chr5:146972800-146990400 Weak transcription Brain Hippocampus Middle brain
9 chr5:146973400-146991000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr5:146973600-146994800 Weak transcription Primary T cells fromperipheralblood blood
11 chr5:146974000-146990400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr5:146974400-146990000 Weak transcription Fetal Brain Female brain
13 chr5:146974400-146990200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr5:146974800-146992600 Weak transcription Fetal Lung lung
15 chr5:146975000-146988400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr5:146975000-146989800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr5:146975200-146989600 Weak transcription Brain Substantia Nigra brain
18 chr5:146975200-146990000 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr5:146976000-146990000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr5:146976200-146991200 Weak transcription Primary T cells from cord blood blood
21 chr5:146977000-146986200 Weak transcription NH-A brain
22 chr5:146977400-147012200 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr5:146977600-146991000 Weak transcription H9 Cell Line embryonic stem cell
24 chr5:146978000-146989600 Weak transcription Brain Inferior Temporal Lobe brain
25 chr5:146979000-146989800 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr5:146980800-146990200 Weak transcription Brain Germinal Matrix brain
27 chr5:146981000-146990400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr5:146981400-146990200 Weak transcription H1 Cell Line embryonic stem cell
29 chr5:146983200-146985400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr5:146983200-146990200 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr5:146983400-146988400 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr5:146984000-146990400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr5:146984000-146990400 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr5:146984200-146988200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr5:146984200-146989600 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr5:146984200-146990000 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr5:146984200-146990000 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr5:146984200-146990000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr5:146984800-146987800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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