Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:4145306..4147487-chr10:4150216..4152593,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10751957	0.96[EUR][1000 genomes]
rs10904196	0.87[EUR][1000 genomes]
rs10904197	0.87[EUR][1000 genomes]
rs11252348	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11252357	0.85[EUR][1000 genomes]
rs11252367	0.87[EUR][1000 genomes]
rs11252372	0.85[EUR][1000 genomes]
rs11252374	0.85[EUR][1000 genomes]
rs12246060	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12263895	0.80[EUR][1000 genomes]
rs1885475	0.87[EUR][1000 genomes]
rs1923392	0.87[EUR][1000 genomes]
rs2146058	1.00[EUR][1000 genomes]
rs57986186	0.85[EUR][1000 genomes]
rs7087085	0.87[EUR][1000 genomes]
rs7101224	0.89[EUR][1000 genomes]
rs73599500	0.85[EUR][1000 genomes]
rs73601413	0.82[EUR][1000 genomes]
rs73601414	0.82[EUR][1000 genomes]
rs7910597	0.85[EUR][1000 genomes]
rs9651517	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051297	chr10:3908706-4277678	Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
2	nsv831772	chr10:4039292-4212218	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4145800-4153400	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr10:4146400-4152400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr10:4146600-4153400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr10:4147200-4152800	Weak transcription	Hela-S3	cervix
5	chr10:4149400-4150400	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr10:4149400-4151600	Enhancers	Adipose Nuclei	Adipose
7	chr10:4149600-4150400	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr10:4150000-4151600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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