Variant report

Variant	rs12282240
Chromosome Location	chr11:34012704-34012705
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:33877952..33881017-chr11:34009873..34013165,3	K562	blood:
2	chr11:34011318..34012869-chr11:34099433..34102017,2	K562	blood:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10836141	0.94[ASN][1000 genomes]
rs10836145	0.83[AMR][1000 genomes]
rs11032474	0.83[ASN][1000 genomes]
rs11032475	0.91[ASN][1000 genomes]
rs11032485	0.83[AMR][1000 genomes]
rs11032487	0.83[AMR][1000 genomes]
rs12272003	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12277616	0.98[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12285326	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12290109	0.94[ASN][1000 genomes]
rs12292366	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12418479	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12421153	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12421249	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12576882	0.83[AMR][1000 genomes]
rs12787303	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12789531	0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12795523	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12797090	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12799109	0.98[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs35836121	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4316483	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4755356	0.91[ASN][1000 genomes]
rs4756093	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7112270	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7120707	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34006400-34018200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:34012600-34012800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links