Variant report

Variant	rs12795523
Chromosome Location	chr11:34014510-34014511
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:34013418..34015422-chr11:34129714..34132635,2	K562	blood:
2	chr11:34012814..34016212-chr11:34072473..34075239,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000135372	Chromatin interaction
ENSG00000135387	Chromatin interaction

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10836141	0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10836145	0.83[AMR][1000 genomes]
rs11032474	0.82[ASN][1000 genomes]
rs11032475	0.91[ASN][1000 genomes]
rs11032485	0.83[AMR][1000 genomes]
rs11032487	0.83[AMR][1000 genomes]
rs12272003	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12277616	0.98[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12282240	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12285326	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12290109	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12292366	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12418479	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12421153	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12421249	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12576882	0.83[AMR][1000 genomes]
rs12787303	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12789531	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12797090	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12799109	0.98[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35836121	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4316483	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4755356	0.92[ASN][1000 genomes]
rs4756093	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7112270	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7120707	0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34006400-34018200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:34013400-34018400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
3	chr11:34013400-34018800	Weak transcription	Dnd41	blood
4	chr11:34013600-34018400	Weak transcription	Primary T helper cells fromperipheralblood	blood

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