The 2.0 version of rSNPBase

Variant report

Variant rs12609005
Chromosome Location chr19:21245429-21245430
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21204400-21264800 Weak transcription Right Ventricle heart
2 chr19:21227800-21247200 Weak transcription HepG2 liver
3 chr19:21230600-21248400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr19:21236000-21247000 Weak transcription Pancreas Pancrea
5 chr19:21236400-21264800 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr19:21238400-21248400 Weak transcription Psoas Muscle Psoas
7 chr19:21239200-21246800 Weak transcription Aorta Aorta
8 chr19:21239800-21249400 Weak transcription Hela-S3 cervix
9 chr19:21240000-21247400 Weak transcription Brain Substantia Nigra brain
10 chr19:21240000-21264800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr19:21240000-21264800 Weak transcription Brain Inferior Temporal Lobe brain
12 chr19:21240200-21246200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr19:21240200-21247600 Weak transcription Brain Cingulate Gyrus brain
14 chr19:21240200-21264800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr19:21240800-21246800 Weak transcription Brain Hippocampus Middle brain
16 chr19:21240800-21250000 Weak transcription Fetal Thymus thymus
17 chr19:21240800-21256800 Weak transcription Placenta Amnion Placenta Amnion
18 chr19:21241000-21246800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr19:21241000-21246800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr19:21241000-21246800 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr19:21241000-21246800 Weak transcription Stomach Smooth Muscle stomach
22 chr19:21241000-21247000 Weak transcription Osteobl bone
23 chr19:21241000-21248200 Weak transcription Brain Angular Gyrus brain
24 chr19:21241000-21248200 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr19:21241000-21248200 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr19:21241000-21264800 Weak transcription Gastric stomach
27 chr19:21241200-21245600 Weak transcription Fetal Muscle Leg muscle
28 chr19:21241200-21246000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr19:21241200-21247200 Weak transcription Adipose Nuclei Adipose
30 chr19:21241200-21248000 Weak transcription Fetal Muscle Trunk muscle
31 chr19:21241200-21251000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr19:21241200-21251000 Weak transcription NH-A brain
33 chr19:21241200-21264800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr19:21241400-21246800 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr19:21241400-21249600 Weak transcription Placenta Placenta
36 chr19:21241400-21251000 Weak transcription Fetal Kidney kidney
37 chr19:21241400-21251800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr19:21241400-21252200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr19:21241400-21253600 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr19:21241400-21264800 Weak transcription HSMMtube muscle
41 chr19:21241600-21246600 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr19:21241600-21246600 Weak transcription NHDF-Ad bronchial
43 chr19:21241600-21247000 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr19:21241600-21247400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr19:21241600-21247400 Weak transcription Fetal Lung lung
46 chr19:21241600-21248000 Weak transcription NHEK skin
47 chr19:21241600-21264800 Weak transcription Brain Anterior Caudate brain
48 chr19:21241600-21265000 Weak transcription HMEC breast
49 chr19:21241800-21247400 Weak transcription NHLF lung
50 chr19:21242000-21246600 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015