The 2.0 version of rSNPBase

Variant report

Variant rs8107982
Chromosome Location chr19:21242852-21242853
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21204400-21264800 Weak transcription Right Ventricle heart
2 chr19:21223000-21244200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr19:21227800-21247200 Weak transcription HepG2 liver
4 chr19:21230600-21248400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr19:21230800-21243000 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr19:21231800-21244600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr19:21232200-21243600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr19:21235400-21243200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
9 chr19:21236000-21247000 Weak transcription Pancreas Pancrea
10 chr19:21236400-21264800 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr19:21238400-21248400 Weak transcription Psoas Muscle Psoas
12 chr19:21239000-21243200 Weak transcription K562 blood
13 chr19:21239200-21245400 Weak transcription Esophagus oesophagus
14 chr19:21239200-21246800 Weak transcription Aorta Aorta
15 chr19:21239800-21249400 Weak transcription Hela-S3 cervix
16 chr19:21240000-21247400 Weak transcription Brain Substantia Nigra brain
17 chr19:21240000-21264800 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr19:21240000-21264800 Weak transcription Brain Inferior Temporal Lobe brain
19 chr19:21240200-21245400 Weak transcription Ovary ovary
20 chr19:21240200-21246200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr19:21240200-21247600 Weak transcription Brain Cingulate Gyrus brain
22 chr19:21240200-21264800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr19:21240800-21243000 Weak transcription Colon Smooth Muscle Colon
24 chr19:21240800-21243800 Weak transcription H1 Cell Line embryonic stem cell
25 chr19:21240800-21246800 Weak transcription Brain Hippocampus Middle brain
26 chr19:21240800-21250000 Weak transcription Fetal Thymus thymus
27 chr19:21240800-21256800 Weak transcription Placenta Amnion Placenta Amnion
28 chr19:21241000-21245400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr19:21241000-21245400 Weak transcription Brain Germinal Matrix brain
30 chr19:21241000-21246800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr19:21241000-21246800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr19:21241000-21246800 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr19:21241000-21246800 Weak transcription Stomach Smooth Muscle stomach
34 chr19:21241000-21247000 Weak transcription Osteobl bone
35 chr19:21241000-21248200 Weak transcription Brain Angular Gyrus brain
36 chr19:21241000-21248200 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr19:21241000-21248200 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr19:21241000-21264800 Weak transcription Gastric stomach
39 chr19:21241200-21245200 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr19:21241200-21245200 Weak transcription Fetal Stomach stomach
41 chr19:21241200-21245400 Weak transcription Left Ventricle heart
42 chr19:21241200-21245400 Weak transcription Thymus Thymus
43 chr19:21241200-21245600 Weak transcription Fetal Muscle Leg muscle
44 chr19:21241200-21246000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr19:21241200-21247200 Weak transcription Adipose Nuclei Adipose
46 chr19:21241200-21248000 Weak transcription Fetal Muscle Trunk muscle
47 chr19:21241200-21251000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr19:21241200-21251000 Weak transcription NH-A brain
49 chr19:21241200-21264800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr19:21241400-21246800 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015