Variant report

Variant	rs2358792
Chromosome Location	chr19:21205232-21205233
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:21204714..21207211-chr19:21209787..21213344,3	K562	blood:

Extended variants
information (count: 160 )
Associated
traits (count: 11 )

rSNPs within LD-proxies of this variant (count:151)

rs_ID	r²[population]
rs10164375	0.82[ASN][1000 genomes]
rs10401931	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.87[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10405180	0.80[ASN][1000 genomes]
rs10405218	0.80[ASN][1000 genomes]
rs10406661	1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[JPT][hapmap];0.92[MEX][hapmap];0.82[ASN][1000 genomes]
rs10409844	1.00[CEU][hapmap];0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10409877	0.82[CHB][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs10410901	1.00[CHB][hapmap];0.80[ASN][1000 genomes]
rs10411038	0.80[ASN][1000 genomes]
rs10412267	1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[JPT][hapmap];0.92[MEX][hapmap];0.83[ASN][1000 genomes]
rs10412509	0.81[CHD][hapmap];0.81[JPT][hapmap]
rs10412688	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10413175	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10413692	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10413983	0.83[ASN][1000 genomes]
rs10414134	0.83[ASN][1000 genomes]
rs10417165	0.98[ASN][1000 genomes]
rs10418706	0.94[ASN][1000 genomes]
rs10421819	0.85[ASN][1000 genomes]
rs10422193	0.94[ASN][1000 genomes]
rs10423541	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs10424283	0.83[ASN][1000 genomes]
rs10425969	0.86[ASN][1000 genomes]
rs11085424	0.98[ASN][1000 genomes]
rs11085429	0.83[CEU][hapmap]
rs11085431	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.87[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11666640	0.86[ASN][1000 genomes]
rs11666869	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11668335	0.81[EUR][1000 genomes]
rs11669248	0.93[EUR][1000 genomes]
rs11670162	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11671894	0.98[ASN][1000 genomes]
rs11672142	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11672727	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs11672747	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs12052091	0.83[CEU][hapmap]
rs12104220	0.83[ASN][1000 genomes]
rs12104387	0.95[ASN][1000 genomes]
rs12608706	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12608931	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12609005	0.86[ASN][1000 genomes]
rs12609167	1.00[ASW][hapmap];0.89[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12609427	0.95[EUR][1000 genomes]
rs12609510	0.98[ASN][1000 genomes]
rs12609831	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12611115	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12973640	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12974016	0.80[ASN][1000 genomes]
rs12975789	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12976796	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12981855	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1470021	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs1609441	1.00[CHB][hapmap];0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs1968523	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1971054	0.81[EUR][1000 genomes]
rs1971815	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs1975056	0.83[CEU][hapmap]
rs2013048	0.83[ASN][1000 genomes]
rs2081050	0.97[ASN][1000 genomes]
rs2081052	0.91[ASN][1000 genomes]
rs2081054	0.95[ASN][1000 genomes]
rs2081055	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2081056	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2081057	0.95[ASN][1000 genomes]
rs2098681	1.00[ASN][1000 genomes]
rs2099648	0.94[ASN][1000 genomes]
rs2112803	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2115493	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs2115494	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs2115495	1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[JPT][hapmap]
rs2115496	0.82[JPT][hapmap]
rs2164988	0.87[ASN][1000 genomes]
rs2164989	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2195453	1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[JPT][hapmap]
rs2195454	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs2358795	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2884548	0.95[ASN][1000 genomes]
rs2884554	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs35137761	0.80[ASN][1000 genomes]
rs4255903	0.95[ASN][1000 genomes]
rs4292035	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4365405	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4488591	1.00[CHB][hapmap];0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs4808273	0.85[ASN][1000 genomes]
rs4808275	0.80[ASN][1000 genomes]
rs4809119	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4809122	1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[JPT][hapmap];0.92[MEX][hapmap]
rs62122564	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62122565	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6511175	0.85[ASN][1000 genomes]
rs6511179	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6511181	0.97[ASN][1000 genomes]
rs6511183	0.86[ASN][1000 genomes]
rs6511184	0.86[ASN][1000 genomes]
rs6511186	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6511187	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6511188	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.87[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6511191	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6511192	1.00[CHB][hapmap];0.87[JPT][hapmap];0.80[ASN][1000 genomes]
rs6511194	1.00[CHB][hapmap];0.81[JPT][hapmap];0.80[ASN][1000 genomes]
rs6511195	1.00[CHB][hapmap];0.87[JPT][hapmap];0.80[ASN][1000 genomes]
rs6511196	1.00[CHB][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs7246723	0.85[CHB][hapmap];0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs7247413	0.98[ASN][1000 genomes]
rs7247553	0.94[ASN][1000 genomes]
rs7248087	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7248410	0.80[ASN][1000 genomes]
rs7249283	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.87[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7249736	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7250169	0.83[ASN][1000 genomes]
rs7250274	0.87[AFR][1000 genomes]
rs7252277	0.98[ASN][1000 genomes]
rs7253530	0.98[ASN][1000 genomes]
rs7254047	1.00[CHB][hapmap];0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs7254053	1.00[CHB][hapmap];0.87[JPT][hapmap];0.82[ASN][1000 genomes]
rs7254722	0.95[ASN][1000 genomes]
rs7254768	0.94[ASN][1000 genomes]
rs7254982	0.82[ASN][1000 genomes]
rs7257481	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7258195	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7258409	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7258477	0.95[ASN][1000 genomes]
rs7258831	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7259653	0.95[ASN][1000 genomes]
rs7260268	1.00[CHB][hapmap];0.96[CHD][hapmap];0.93[JPT][hapmap];0.83[ASN][1000 genomes]
rs7260600	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.87[JPT][hapmap];0.89[LWK][hapmap];0.92[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7343175	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8100289	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs8100599	0.83[ASN][1000 genomes]
rs8101222	0.80[ASN][1000 genomes]
rs8101412	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs8101461	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs8102966	0.95[ASN][1000 genomes]
rs8103696	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8103825	0.80[ASN][1000 genomes]
rs8106801	1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[JPT][hapmap];0.83[ASN][1000 genomes]
rs8106923	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs8107638	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs8107982	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8109549	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8109577	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8111827	1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[JPT][hapmap];0.92[MEX][hapmap];0.80[ASN][1000 genomes]
rs8112054	1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[JPT][hapmap];0.86[ASN][1000 genomes]
rs8112216	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.87[JPT][hapmap];0.97[LWK][hapmap];0.83[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8112500	0.80[ASN][1000 genomes]
rs8113541	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.90[YRI][hapmap];0.89[AFR][1000 genomes]
rs8182465	1.00[CHB][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs9304980	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.87[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9304981	0.87[JPT][hapmap]
rs9304982	0.85[CHB][hapmap];1.00[CHD][hapmap];0.86[JPT][hapmap];0.92[MEX][hapmap];0.80[ASN][1000 genomes]
rs9941463	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1062776	chr19:20818886-21273361	Weak transcription Active TSS Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
2	nsv932110	chr19:20818886-21278952	Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
3	esv2763043	chr19:20818886-21290543	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
4	esv3385528	chr19:21030777-21495566	Active TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
5	nsv817536	chr19:21041855-21348237	Strong transcription Enhancers Genic enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
6	esv1850387	chr19:21109758-21294264	Active TSS ZNF genes & repeats Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
7	nsv911411	chr19:21184533-21263518	ZNF genes & repeats Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
8	nsv578949	chr19:21190572-21244049	ZNF genes & repeats Genic enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
9	nsv960811	chr19:21200306-21371757	Strong transcription Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

mRNA abundance (count:11)

SNP	Gene	Cis/trans	Tissue	Source
rs2358792	ZNF100	cis	cerebellum	SCAN
rs2358792	ZNF429	cis	parietal	SCAN
rs2358792	ZNF681	cis	cerebellum	SCAN
rs2358792	ZNF714	cis	parietal	SCAN
rs2358792	ZNF714	cis	Esophagus Muscularis	GTEx
rs2358792	ZNF714	cis	cerebellum	SCAN
rs2358792	MYO9B	cis	cerebellum	SCAN
rs2358792	ZNF714	cis	Nerve Tibial	GTEx
rs2358792	ZNF429	cis	cerebellum	SCAN
rs2358792	RFXANK	cis	cerebellum	SCAN
rs2358792	ZNF737	cis	parietal	SCAN

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:21203000-21205400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr19:21203000-21205400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr19:21203000-21205400	Active TSS	GM12878-XiMat	blood
4	chr19:21203000-21205400	Active TSS	HSMMtube	muscle
5	chr19:21203000-21205600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr19:21203000-21206200	Active TSS	NHLF	lung
7	chr19:21204200-21208000	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr19:21204200-21210600	Weak transcription	Fetal Heart	heart
9	chr19:21204200-21224400	Weak transcription	Liver	Liver
10	chr19:21204200-21230400	Weak transcription	Gastric	stomach
11	chr19:21204400-21205400	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
12	chr19:21204400-21205400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
13	chr19:21204400-21205600	Enhancers	Primary B cells from peripheral blood	blood
14	chr19:21204400-21205600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr19:21204400-21205600	Weak transcription	Fetal Muscle Trunk	muscle
16	chr19:21204400-21205800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
17	chr19:21204400-21205800	Weak transcription	Rectal Mucosa Donor 31	rectum
18	chr19:21204400-21206600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr19:21204400-21206600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr19:21204400-21206800	Weak transcription	Left Ventricle	heart
21	chr19:21204400-21207200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr19:21204400-21208200	Weak transcription	Lung	lung
23	chr19:21204400-21210800	Weak transcription	Brain Substantia Nigra	brain
24	chr19:21204400-21213400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr19:21204400-21213400	Weak transcription	Esophagus	oesophagus
26	chr19:21204400-21213800	Weak transcription	Psoas Muscle	Psoas
27	chr19:21204400-21224000	Weak transcription	Aorta	Aorta
28	chr19:21204400-21224400	Weak transcription	Pancreas	Pancrea
29	chr19:21204400-21227200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr19:21204400-21229200	Weak transcription	Rectal Smooth Muscle	rectum
31	chr19:21204400-21231600	Weak transcription	Colonic Mucosa	Colon
32	chr19:21204400-21264800	Weak transcription	Right Ventricle	heart
33	chr19:21204600-21205400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr19:21204600-21205400	Weak transcription	Primary neutrophils fromperipheralblood	blood
35	chr19:21204600-21205400	Enhancers	Primary hematopoietic stem cells	blood
36	chr19:21204600-21205400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
37	chr19:21204600-21205400	Enhancers	Primary T killer memory cells from peripheral blood	blood
38	chr19:21204600-21205400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr19:21204600-21205400	Enhancers	Fetal Brain Male	brain
40	chr19:21204600-21205400	Weak transcription	Fetal Intestine Large	intestine
41	chr19:21204600-21205400	Genic enhancers	Fetal Stomach	stomach
42	chr19:21204600-21205400	Weak transcription	A549	lung
43	chr19:21204600-21205400	Enhancers	Monocytes-CD14+_RO01746	blood
44	chr19:21204600-21205400	Weak transcription	NH-A	brain
45	chr19:21204600-21205600	Weak transcription	HUVEC	blood vessel
46	chr19:21204600-21205800	Weak transcription	Brain Cingulate Gyrus	brain
47	chr19:21204600-21205800	Enhancers	Thymus	Thymus
48	chr19:21204600-21205800	Enhancers	HepG2	liver
49	chr19:21204600-21206000	Weak transcription	H9 Cell Line	embryonic stem cell
50	chr19:21204600-21206000	Enhancers	Primary T cells fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links