The 2.0 version of rSNPBase

Variant report

Variant rs10412688
Chromosome Location chr19:21224374-21224375
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21204200-21224400 Weak transcription Liver Liver
2 chr19:21204200-21230400 Weak transcription Gastric stomach
3 chr19:21204400-21224400 Weak transcription Pancreas Pancrea
4 chr19:21204400-21227200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:21204400-21229200 Weak transcription Rectal Smooth Muscle rectum
6 chr19:21204400-21231600 Weak transcription Colonic Mucosa Colon
7 chr19:21204400-21264800 Weak transcription Right Ventricle heart
8 chr19:21204600-21227800 Weak transcription Brain Angular Gyrus brain
9 chr19:21204600-21239800 Weak transcription Colon Smooth Muscle Colon
10 chr19:21206200-21226600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr19:21206200-21241600 Weak transcription H9 Cell Line embryonic stem cell
12 chr19:21207200-21239400 Weak transcription Hela-S3 cervix
13 chr19:21207400-21226600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr19:21208600-21230000 Weak transcription H1 Cell Line embryonic stem cell
15 chr19:21209200-21235600 Weak transcription Stomach Smooth Muscle stomach
16 chr19:21210200-21232200 Weak transcription K562 blood
17 chr19:21211400-21235400 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr19:21211600-21224400 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr19:21211800-21228800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
20 chr19:21212000-21226000 Weak transcription Brain Inferior Temporal Lobe brain
21 chr19:21212000-21227400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr19:21212000-21228000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr19:21212000-21228200 Weak transcription Brain Hippocampus Middle brain
24 chr19:21212000-21241400 Weak transcription Fetal Heart heart
25 chr19:21212400-21224400 Strong transcription Dnd41 blood
26 chr19:21213400-21227000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr19:21213800-21224800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr19:21214000-21230200 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr19:21214200-21224400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr19:21216000-21224400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr19:21216000-21225400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
32 chr19:21216000-21225400 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr19:21216000-21229800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr19:21216200-21225800 Strong transcription Primary neutrophils fromperipheralblood blood
35 chr19:21217200-21226600 Weak transcription Muscle Satellite Cultured Cells --
36 chr19:21217400-21227200 Weak transcription HepG2 liver
37 chr19:21217400-21230200 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr19:21217400-21230400 Weak transcription NHEK skin
39 chr19:21218000-21227600 Weak transcription Brain Anterior Caudate brain
40 chr19:21218600-21224400 Weak transcription HUVEC blood vessel
41 chr19:21218600-21227200 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr19:21218800-21224400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr19:21218800-21225600 Strong transcription Primary T helper cells fromperipheralblood blood
44 chr19:21218800-21226200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr19:21218800-21226200 Weak transcription Brain Cingulate Gyrus brain
46 chr19:21218800-21230400 Weak transcription NHLF lung
47 chr19:21219600-21226200 Strong transcription Primary T helper cells PMA-I stimulated --
48 chr19:21219600-21226600 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr19:21220400-21235200 Weak transcription NHDF-Ad bronchial
50 chr19:21220800-21225800 Strong transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015