The 2.0 version of rSNPBase

Variant report

Variant rs12974016
Chromosome Location chr19:21288779-21288780
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21247400-21289600 Weak transcription Aorta Aorta
2 chr19:21265600-21295800 Weak transcription Small Intestine intestine
3 chr19:21265600-21300000 Weak transcription Brain Angular Gyrus brain
4 chr19:21265600-21305200 Weak transcription Psoas Muscle Psoas
5 chr19:21265800-21289800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr19:21265800-21290600 Weak transcription Adipose Nuclei Adipose
7 chr19:21265800-21297200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr19:21265800-21297200 Weak transcription Brain Cingulate Gyrus brain
9 chr19:21265800-21299600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr19:21265800-21299800 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr19:21265800-21302200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr19:21265800-21302800 Weak transcription Fetal Muscle Trunk muscle
13 chr19:21265800-21303000 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr19:21266000-21289400 Weak transcription Primary hematopoietic stem cells blood
15 chr19:21266000-21290800 Weak transcription Brain Anterior Caudate brain
16 chr19:21266000-21290800 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr19:21266000-21290800 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr19:21266000-21292600 Weak transcription Fetal Kidney kidney
19 chr19:21266000-21297400 Weak transcription HUVEC blood vessel
20 chr19:21266200-21288800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr19:21266200-21289800 Weak transcription Primary T cells fromperipheralblood blood
22 chr19:21266200-21292400 Weak transcription Primary T cells from cord blood blood
23 chr19:21266200-21296600 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr19:21266200-21301600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr19:21266800-21292600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr19:21267000-21292800 Strong transcription HUES48 Cell Line embryonic stem cell
27 chr19:21267200-21295800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr19:21271200-21296000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr19:21274200-21289600 Weak transcription Fetal Thymus thymus
30 chr19:21274400-21291200 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr19:21275400-21289800 Weak transcription Pancreas Pancrea
32 chr19:21275400-21292800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr19:21275400-21294200 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr19:21275400-21297200 Weak transcription Rectal Smooth Muscle rectum
35 chr19:21275400-21301400 Weak transcription Fetal Brain Male brain
36 chr19:21275400-21304600 Weak transcription Stomach Smooth Muscle stomach
37 chr19:21275600-21290800 Weak transcription Muscle Satellite Cultured Cells --
38 chr19:21275600-21293000 Weak transcription Primary B cells from cord blood blood
39 chr19:21275600-21299000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr19:21276200-21293000 Strong transcription HUES64 Cell Line embryonic stem cell
41 chr19:21276400-21293000 Strong transcription HUES6 Cell Line embryonic stem cell
42 chr19:21278200-21292600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr19:21279600-21289800 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr19:21280000-21297400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr19:21281200-21288800 Strong transcription Fetal Intestine Large intestine
46 chr19:21281600-21290000 Strong transcription H1 Cell Line embryonic stem cell
47 chr19:21281600-21291600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr19:21281800-21300000 Weak transcription HMEC breast
49 chr19:21282000-21288800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr19:21282400-21291200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015