Variant report

Variant	rs12648091
Chromosome Location	chr4:107291528-107291529
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:10)
CpG islands
(count:0)
Chromatin interactive
region (count:2)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:10 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SPI1	chr4:107291436-107291624	K562	blood:	n/a	n/a
2	SPI1	chr4:107291321-107291745	GM12891	blood:	n/a	n/a
3	SPI1	chr4:107291332-107291857	HL-60	blood:	n/a	n/a
4	SPI1	chr4:107291347-107291671	GM12878	blood:	n/a	n/a
5	SPI1	chr4:107291339-107291697	GM12891	blood:	n/a	n/a
6	SPI1	chr4:107291436-107291615	GM12878	blood:	n/a	n/a
7	SPI1	chr4:107291395-107291629	K562	blood:	n/a	n/a
8	MAZ	chr4:107291521-107291714	HepG2	liver:	n/a	n/a
9	SPI1	chr4:107291288-107291778	HL-60	blood:	n/a	n/a
10	CTCF	chr4:107291460-107291610	GM06990	blood:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:107290301..107292526-chr4:107422827..107424058,19	MCF-7	breast:
2	chr4:107290348..107291609-chr4:107422851..107424531,10	MCF-7	breast:

No data

Variant related genes	Relation type
GIMD1	TF binding region

Extended variants
information (count: 165 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:163)

rs_ID	r²[population]
rs10016884	0.82[CEU][hapmap]
rs10084928	0.87[ASN][1000 genomes]
rs10433894	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10516532	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10516533	0.88[CEU][hapmap];0.91[CHB][hapmap];0.87[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10516534	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11097914	0.87[ASN][1000 genomes]
rs11097916	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11097917	0.82[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11097919	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11097924	0.84[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11097925	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11097927	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11097928	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11097929	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11930970	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11940160	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11947335	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12499891	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12500295	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12500775	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12501801	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12502764	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12503753	0.84[ASN][1000 genomes]
rs12504704	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.87[ASN][1000 genomes]
rs12504721	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12506062	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12507429	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12508432	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12509865	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12510058	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12511305	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12512877	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12512903	0.84[CEU][hapmap];0.91[CHB][hapmap];0.87[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12512966	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12639869	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12641015	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12641037	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12642059	0.82[CEU][hapmap];0.87[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12642227	0.87[ASN][1000 genomes]
rs12642454	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12643397	0.87[ASN][1000 genomes]
rs12644259	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12644596	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12645255	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12645271	0.83[CEU][hapmap];0.89[CHB][hapmap];0.86[JPT][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12645490	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12645698	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12645743	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12646263	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12646485	0.87[ASN][1000 genomes]
rs12647078	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12649709	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12651360	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13534	0.91[ASN][1000 genomes]
rs17036613	0.81[CHB][hapmap];0.80[JPT][hapmap];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17273093	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17273445	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17274017	0.83[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17274248	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17275217	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17333287	0.83[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17333732	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17333879	0.84[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17333899	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1988695	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2290607	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34193646	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34899289	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34961213	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3737497	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3737498	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3762945	0.84[CEU][hapmap];0.83[JPT][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3762946	0.89[AFR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3762947	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3775090	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3792718	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3805405	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3805407	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3805409	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3805410	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3805411	0.88[CEU][hapmap];0.81[CHB][hapmap];0.80[JPT][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4422480	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4429790	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4466113	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4481295	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4607300	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4645291	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55634475	0.87[ASN][1000 genomes]
rs55710349	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs55726133	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55753411	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55833794	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs56009469	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56135499	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56231393	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56329826	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56333662	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56775039	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56833325	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs57246774	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs59228887	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59784613	0.87[ASN][1000 genomes]
rs61256759	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61544154	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6533240	0.83[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6533243	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6533245	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6533246	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6810877	0.84[ASN][1000 genomes]
rs6814166	0.88[CEU][hapmap];0.90[CHB][hapmap];0.88[JPT][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6815014	0.82[CEU][hapmap];0.84[CHB][hapmap];0.86[JPT][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6816614	0.87[ASN][1000 genomes]
rs6816698	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6818197	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6818626	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6819224	0.88[CEU][hapmap];0.91[CHB][hapmap];0.87[JPT][hapmap];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6819742	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6822692	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6827816	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6828660	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6829795	0.87[ASN][1000 genomes]
rs6831032	0.88[CEU][hapmap];0.91[CHB][hapmap];0.87[JPT][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6831665	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6838283	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6843870	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6844324	0.87[ASN][1000 genomes]
rs6849341	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6856408	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6858391	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72876575	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72876590	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72876592	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72876594	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72878537	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72893620	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7340989	0.84[ASN][1000 genomes]
rs73839422	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73839455	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73839456	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7654865	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7655054	0.87[ASN][1000 genomes]
rs7658701	0.87[ASN][1000 genomes]
rs7661565	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7662219	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7662291	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7662395	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7665946	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7667719	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7668477	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7669212	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7673949	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7674460	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7674796	0.88[EUR][1000 genomes]
rs7674931	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7678749	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7678943	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7688008	0.84[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7688411	0.88[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7697996	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7699768	0.83[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9684658	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9685018	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830029	chr4:107203096-107353483	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv1008963	chr4:107282656-107384924	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs12648091	MGC16169	cis	multi-tissue	Pritchard
rs12648091	SCYE1	Cis_1M	lymphoblastoid	RTeQTL
rs12648091	MGC16169	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:107290400-107291600	Enhancers	Muscle Satellite Cultured Cells	--
2	chr4:107290800-107291600	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr4:107290800-107291600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr4:107291200-107291600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr4:107291200-107291800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr4:107291200-107292400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr4:107291200-107292600	Enhancers	NHDF-Ad	bronchial
8	chr4:107291400-107291600	Enhancers	Monocytes-CD14+_RO01746	blood

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