The 2.0 version of rSNPBase

Variant report

Variant rs34193646
Chromosome Location chr4:107151929-107151930
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:107071800-107176400 Weak transcription Rectal Smooth Muscle rectum
2 chr4:107083200-107173400 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr4:107083800-107164800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr4:107085400-107169600 Weak transcription Fetal Kidney kidney
5 chr4:107088400-107166400 Weak transcription K562 blood
6 chr4:107105000-107169600 Weak transcription Fetal Brain Female brain
7 chr4:107106800-107176400 Weak transcription Brain Cingulate Gyrus brain
8 chr4:107111800-107160200 Weak transcription NHEK skin
9 chr4:107112400-107170400 Weak transcription Thymus Thymus
10 chr4:107113000-107154800 Weak transcription Brain Angular Gyrus brain
11 chr4:107114600-107236000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr4:107114800-107154000 Weak transcription Brain Anterior Caudate brain
13 chr4:107114800-107154200 Weak transcription Placenta Amnion Placenta Amnion
14 chr4:107114800-107170400 Weak transcription Brain Inferior Temporal Lobe brain
15 chr4:107115000-107176400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr4:107116800-107193800 Weak transcription Small Intestine intestine
17 chr4:107128200-107176400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr4:107128400-107176400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr4:107130000-107181200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr4:107130200-107155400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr4:107130200-107164800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr4:107130200-107164800 Weak transcription Ovary ovary
23 chr4:107130200-107176400 Weak transcription Esophagus oesophagus
24 chr4:107130200-107176400 Weak transcription Fetal Stomach stomach
25 chr4:107130200-107176400 Weak transcription Lung lung
26 chr4:107130200-107176600 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr4:107130400-107155400 Weak transcription Fetal Muscle Leg muscle
28 chr4:107130400-107176400 Weak transcription Pancreas Pancrea
29 chr4:107130600-107176400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr4:107134000-107153000 Weak transcription HUVEC blood vessel
31 chr4:107134200-107154200 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr4:107140600-107154200 Weak transcription Brain Substantia Nigra brain
33 chr4:107141600-107176400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr4:107141600-107176400 Weak transcription Aorta Aorta
35 chr4:107141600-107214800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr4:107142400-107195800 Weak transcription Psoas Muscle Psoas
37 chr4:107144000-107153200 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr4:107144000-107176400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr4:107144600-107172000 Weak transcription H1 Cell Line embryonic stem cell
40 chr4:107144800-107170400 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr4:107144800-107179600 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr4:107145200-107170200 Weak transcription NHLF lung
43 chr4:107145600-107167400 Weak transcription Brain Germinal Matrix brain
44 chr4:107145800-107177400 Weak transcription Colonic Mucosa Colon
45 chr4:107146400-107176400 Weak transcription Right Ventricle heart
46 chr4:107147200-107158000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr4:107147400-107153000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr4:107147400-107160000 Weak transcription Fetal Intestine Small intestine
49 chr4:107147400-107164800 Weak transcription Left Ventricle heart
50 chr4:107148000-107157400 Strong transcription HSMM muscle

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Last update: Aug 31, 2015