Variant report
| Variant | rs28391259 |
|---|---|
| Chromosome Location | chr4:107014012-107014013 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:106994600-107015000 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 2 | chr4:106997200-107031000 | Weak transcription | Psoas Muscle | Psoas |
| 3 | chr4:107001200-107018600 | Weak transcription | HUVEC | blood vessel |
| 4 | chr4:107009600-107014800 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
| 5 | chr4:107009800-107014200 | ZNF genes & repeats | Lung | lung |
| 6 | chr4:107010000-107014200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 7 | chr4:107010000-107014200 | ZNF genes & repeats | Esophagus | oesophagus |
| 8 | chr4:107010000-107014400 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 9 | chr4:107010000-107014600 | ZNF genes & repeats | Fetal Stomach | stomach |
| 10 | chr4:107010200-107014200 | ZNF genes & repeats | Placenta | Placenta |
| 11 | chr4:107010200-107025400 | Weak transcription | Small Intestine | intestine |
| 12 | chr4:107010800-107014200 | ZNF genes & repeats | Gastric | stomach |
| 13 | chr4:107010800-107014200 | ZNF genes & repeats | Spleen | Spleen |
| 14 | chr4:107011000-107014800 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 15 | chr4:107011400-107014200 | ZNF genes & repeats | Fetal Intestine Large | intestine |
| 16 | chr4:107012400-107014200 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 17 | chr4:107012400-107024400 | Weak transcription | Fetal Heart | heart |
| 18 | chr4:107012400-107026800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 19 | chr4:107012600-107014400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 20 | chr4:107012600-107014600 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 21 | chr4:107012600-107016200 | Weak transcription | HepG2 | liver |
| 22 | chr4:107012600-107017600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 23 | chr4:107012600-107017600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 24 | chr4:107012600-107017800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 25 | chr4:107012600-107025000 | Weak transcription | Brain Substantia Nigra | brain |
| 26 | chr4:107012600-107025200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 27 | chr4:107012600-107026200 | Weak transcription | Stomach Mucosa | stomach |
| 28 | chr4:107012600-107026600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 29 | chr4:107012600-107026600 | Weak transcription | GM12878-XiMat | blood |
| 30 | chr4:107012600-107026600 | Weak transcription | HSMM | muscle |
| 31 | chr4:107012600-107026800 | Weak transcription | Fetal Kidney | kidney |
| 32 | chr4:107012600-107029800 | Weak transcription | Fetal Brain Male | brain |
| 33 | chr4:107012600-107029800 | Weak transcription | Dnd41 | blood |
| 34 | chr4:107012600-107031200 | Weak transcription | Brain Angular Gyrus | brain |
| 35 | chr4:107012600-107033200 | Weak transcription | Osteobl | bone |
| 36 | chr4:107012600-107033800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 37 | chr4:107012600-107034400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 38 | chr4:107012600-107038400 | Weak transcription | NHDF-Ad | bronchial |
| 39 | chr4:107012800-107014600 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 40 | chr4:107012800-107014600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 41 | chr4:107012800-107014600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 42 | chr4:107012800-107014800 | Weak transcription | Primary B cells from cord blood | blood |
| 43 | chr4:107012800-107015200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 44 | chr4:107012800-107016000 | Strong transcription | Ovary | ovary |
| 45 | chr4:107012800-107017000 | Strong transcription | Liver | Liver |
| 46 | chr4:107012800-107019600 | Weak transcription | Fetal Lung | lung |
| 47 | chr4:107012800-107022200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 48 | chr4:107012800-107024600 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 49 | chr4:107012800-107024600 | Weak transcription | Brain Anterior Caudate | brain |
| 50 | chr4:107012800-107024800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
