Variant report
| Variant | rs12508552 |
|---|---|
| Chromosome Location | chr4:107030624-107030625 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:106997200-107031000 | Weak transcription | Psoas Muscle | Psoas |
| 2 | chr4:107012600-107031200 | Weak transcription | Brain Angular Gyrus | brain |
| 3 | chr4:107012600-107033200 | Weak transcription | Osteobl | bone |
| 4 | chr4:107012600-107033800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 5 | chr4:107012600-107034400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 6 | chr4:107012600-107038400 | Weak transcription | NHDF-Ad | bronchial |
| 7 | chr4:107012800-107031400 | Weak transcription | HSMMtube | muscle |
| 8 | chr4:107012800-107033400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 9 | chr4:107013000-107031000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 10 | chr4:107014000-107031000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 11 | chr4:107014000-107031000 | Weak transcription | Fetal Thymus | thymus |
| 12 | chr4:107014000-107031200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 13 | chr4:107014000-107034600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 14 | chr4:107014200-107030800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 15 | chr4:107014200-107031000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 16 | chr4:107014200-107031200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 17 | chr4:107014200-107031200 | Weak transcription | Colonic Mucosa | Colon |
| 18 | chr4:107014200-107031200 | Weak transcription | Gastric | stomach |
| 19 | chr4:107014400-107031200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 20 | chr4:107014600-107031200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 21 | chr4:107014800-107031200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 22 | chr4:107025400-107031000 | Weak transcription | Lung | lung |
| 23 | chr4:107025400-107031200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 24 | chr4:107025600-107031000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 25 | chr4:107025600-107031000 | Weak transcription | Thymus | Thymus |
| 26 | chr4:107025600-107031200 | Weak transcription | Pancreas | Pancrea |
| 27 | chr4:107026200-107031000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 28 | chr4:107026200-107031000 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 29 | chr4:107026200-107031200 | Weak transcription | Esophagus | oesophagus |
| 30 | chr4:107026200-107033600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 31 | chr4:107026400-107031200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 32 | chr4:107026400-107031200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 33 | chr4:107026600-107031000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 34 | chr4:107026800-107031000 | Weak transcription | Fetal Stomach | stomach |
| 35 | chr4:107026800-107031000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 36 | chr4:107026800-107031000 | Weak transcription | Spleen | Spleen |
| 37 | chr4:107026800-107035800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 38 | chr4:107027000-107031000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 39 | chr4:107027200-107031200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 40 | chr4:107027200-107031400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 41 | chr4:107027400-107030800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 42 | chr4:107027400-107031200 | Weak transcription | HSMM | muscle |
| 43 | chr4:107027400-107031400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 44 | chr4:107028000-107031000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 45 | chr4:107028000-107031000 | Weak transcription | Left Ventricle | heart |
| 46 | chr4:107028000-107031000 | Weak transcription | HepG2 | liver |
| 47 | chr4:107029000-107037800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 48 | chr4:107029400-107034400 | ZNF genes & repeats | Fetal Muscle Leg | muscle |
| 49 | chr4:107029800-107031600 | Strong transcription | Primary T cells from cord blood | blood |
| 50 | chr4:107029800-107033400 | ZNF genes & repeats | Brain Germinal Matrix | brain |
