The 2.0 version of rSNPBase

Variant report

Variant rs7657962
Chromosome Location chr4:106966715-106966716
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:106955000-106969600 Weak transcription NHLF lung
2 chr4:106956000-106969800 Weak transcription Muscle Satellite Cultured Cells --
3 chr4:106956200-106967200 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr4:106956200-106967400 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr4:106956200-106968200 Weak transcription Fetal Stomach stomach
6 chr4:106956200-106969600 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr4:106956200-106970000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr4:106956600-106969200 Weak transcription Fetal Muscle Leg muscle
9 chr4:106956800-106970800 Weak transcription HSMMtube muscle
10 chr4:106958400-106969200 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr4:106958400-106969400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr4:106959200-106969000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr4:106959200-106969800 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr4:106959600-106969200 Weak transcription Pancreas Pancrea
15 chr4:106959600-106969600 Weak transcription Fetal Kidney kidney
16 chr4:106959600-106983400 Weak transcription HepG2 liver
17 chr4:106960600-106969400 Weak transcription Fetal Muscle Trunk muscle
18 chr4:106961600-106969600 Weak transcription Ovary ovary
19 chr4:106961800-106966800 Weak transcription Psoas Muscle Psoas
20 chr4:106962200-106966800 Weak transcription Adipose Nuclei Adipose
21 chr4:106962400-106969400 Weak transcription NHDF-Ad bronchial
22 chr4:106962600-106970400 Weak transcription Small Intestine intestine
23 chr4:106962800-106967200 Weak transcription HSMM muscle
24 chr4:106962800-106969400 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr4:106963200-106967000 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr4:106963600-106966800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr4:106964200-106966800 Weak transcription Placenta Placenta
28 chr4:106964200-106967200 Weak transcription Osteobl bone
29 chr4:106964200-106972000 Weak transcription Aorta Aorta
30 chr4:106964600-106967200 Weak transcription GM12878-XiMat blood
31 chr4:106965000-106969600 Weak transcription Brain Hippocampus Middle brain
32 chr4:106965000-106969600 Weak transcription Fetal Heart heart
33 chr4:106965200-106966800 Weak transcription Primary hematopoietic stem cells blood
34 chr4:106965200-106969400 Weak transcription Fetal Brain Female brain
35 chr4:106965400-106969600 Weak transcription Brain Substantia Nigra brain
36 chr4:106965800-106968200 Weak transcription Brain Anterior Caudate brain
37 chr4:106965800-106977600 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr4:106966000-106967800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr4:106966000-106968400 Weak transcription Primary B cells from peripheral blood blood
40 chr4:106966200-106968600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr4:106966200-106968800 Weak transcription Primary T cells fromperipheralblood blood
42 chr4:106966200-106970000 Weak transcription Brain Cingulate Gyrus brain
43 chr4:106966400-106966800 Weak transcription Liver Liver
44 chr4:106966400-106968800 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr4:106966600-106967400 Strong transcription Duodenum Mucosa Duodenum
46 chr4:106966600-106967600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr4:106966600-106967600 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr4:106966600-106967800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr4:106966600-106967800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr4:106966600-106967800 Strong transcription Fetal Lung lung

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Last update: Aug 31, 2015