Variant report
| Variant | rs28868894 |
|---|---|
| Chromosome Location | chr4:107035282-107035283 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:107012600-107038400 | Weak transcription | NHDF-Ad | bronchial |
| 2 | chr4:107026800-107035800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 3 | chr4:107029000-107037800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 4 | chr4:107029800-107038000 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 5 | chr4:107030000-107035400 | ZNF genes & repeats | Primary hematopoietic stem cells | blood |
| 6 | chr4:107030000-107035800 | ZNF genes & repeats | Primary B cells from peripheral blood | blood |
| 7 | chr4:107030200-107036200 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
| 8 | chr4:107030600-107035800 | ZNF genes & repeats | Liver | Liver |
| 9 | chr4:107030800-107037800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 10 | chr4:107031000-107036200 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 11 | chr4:107031200-107035800 | ZNF genes & repeats | Sigmoid Colon | Sigmoid Colon |
| 12 | chr4:107031600-107052600 | Weak transcription | Fetal Thymus | thymus |
| 13 | chr4:107031800-107039400 | Weak transcription | Brain Angular Gyrus | brain |
| 14 | chr4:107031800-107053400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 15 | chr4:107032000-107052200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 16 | chr4:107032000-107058200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 17 | chr4:107032200-107038400 | Weak transcription | Fetal Brain Male | brain |
| 18 | chr4:107032400-107037000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 19 | chr4:107032600-107039600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 20 | chr4:107033400-107035800 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 21 | chr4:107033400-107035800 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 22 | chr4:107033400-107039800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 23 | chr4:107033400-107053000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 24 | chr4:107033600-107035600 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 25 | chr4:107033600-107035800 | Strong transcription | Fetal Stomach | stomach |
| 26 | chr4:107033600-107035800 | Strong transcription | Pancreas | Pancrea |
| 27 | chr4:107033600-107037600 | Strong transcription | Brain Hippocampus Middle | brain |
| 28 | chr4:107033600-107037800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 29 | chr4:107033600-107038000 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 30 | chr4:107033600-107052800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 31 | chr4:107033600-107053400 | Weak transcription | Osteobl | bone |
| 32 | chr4:107033800-107035600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 33 | chr4:107033800-107035800 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 34 | chr4:107033800-107035800 | ZNF genes & repeats | Fetal Intestine Large | intestine |
| 35 | chr4:107033800-107035800 | Strong transcription | Dnd41 | blood |
| 36 | chr4:107033800-107036000 | Strong transcription | Brain Anterior Caudate | brain |
| 37 | chr4:107033800-107036200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 38 | chr4:107033800-107036800 | Weak transcription | Brain Substantia Nigra | brain |
| 39 | chr4:107033800-107037800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 40 | chr4:107033800-107038200 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 41 | chr4:107033800-107038400 | Strong transcription | Primary T cells from cord blood | blood |
| 42 | chr4:107033800-107039000 | Weak transcription | HSMMtube | muscle |
| 43 | chr4:107033800-107053400 | Weak transcription | HSMM | muscle |
| 44 | chr4:107034000-107035800 | Strong transcription | Fetal Lung | lung |
| 45 | chr4:107034000-107037800 | Strong transcription | Adipose Nuclei | Adipose |
| 46 | chr4:107034000-107038000 | Strong transcription | Stomach Smooth Muscle | stomach |
| 47 | chr4:107034000-107038400 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 48 | chr4:107034200-107035400 | Weak transcription | Thymus | Thymus |
| 49 | chr4:107034200-107035600 | Strong transcription | Fetal Brain Female | brain |
| 50 | chr4:107034200-107035800 | Strong transcription | Pancreatic Islets | Pancreatic Islet |
