The 2.0 version of rSNPBase

Variant report

Variant rs11940160
Chromosome Location chr4:107247367-107247368
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:107238600-107258000 Weak transcription Gastric stomach
2 chr4:107238600-107258400 Weak transcription Spleen Spleen
3 chr4:107238600-107258600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr4:107238600-107259600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr4:107238600-107259600 Weak transcription Pancreas Pancrea
6 chr4:107238800-107248000 Weak transcription Ovary ovary
7 chr4:107238800-107259000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr4:107239000-107248200 Weak transcription Brain Inferior Temporal Lobe brain
9 chr4:107239000-107252400 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr4:107239000-107252800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr4:107239000-107259200 Weak transcription Fetal Brain Male brain
12 chr4:107239200-107247600 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr4:107239200-107248000 Weak transcription Placenta Amnion Placenta Amnion
14 chr4:107239200-107248800 Weak transcription Fetal Heart heart
15 chr4:107239200-107258400 Weak transcription Aorta Aorta
16 chr4:107239200-107259400 Weak transcription Psoas Muscle Psoas
17 chr4:107239400-107247400 Weak transcription Rectal Smooth Muscle rectum
18 chr4:107239400-107248000 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr4:107239400-107248200 Weak transcription Brain Angular Gyrus brain
20 chr4:107239400-107248200 Weak transcription Brain Hippocampus Middle brain
21 chr4:107239400-107248600 Weak transcription HSMMtube muscle
22 chr4:107239400-107255200 Weak transcription Stomach Mucosa stomach
23 chr4:107239600-107247600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr4:107239600-107248000 Weak transcription Colon Smooth Muscle Colon
25 chr4:107239600-107249200 Weak transcription NHLF lung
26 chr4:107239800-107247400 Weak transcription HMEC breast
27 chr4:107239800-107247600 Weak transcription Brain Cingulate Gyrus brain
28 chr4:107240000-107248200 Weak transcription Hela-S3 cervix
29 chr4:107240200-107248000 Weak transcription K562 blood
30 chr4:107240200-107248800 Weak transcription Brain Substantia Nigra brain
31 chr4:107240400-107247400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr4:107240400-107248000 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr4:107240600-107248600 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr4:107240800-107253000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr4:107241800-107248000 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr4:107242000-107247600 Weak transcription Primary T cells from cord blood blood
37 chr4:107242200-107248000 Weak transcription Fetal Muscle Leg muscle
38 chr4:107242200-107258600 Weak transcription H9 Cell Line embryonic stem cell
39 chr4:107242400-107247600 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr4:107242400-107248000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr4:107242400-107248000 Weak transcription Fetal Muscle Trunk muscle
42 chr4:107242800-107247400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr4:107242800-107247400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr4:107242800-107247400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr4:107242800-107247400 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr4:107242800-107248800 Weak transcription Brain Germinal Matrix brain
47 chr4:107242800-107257800 Weak transcription Esophagus oesophagus
48 chr4:107242800-107258400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr4:107242800-107259400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr4:107243400-107247400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015