The 2.0 version of rSNPBase

Variant report

Variant rs56341229
Chromosome Location chr4:107038096-107038097
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:107012600-107038400 Weak transcription NHDF-Ad bronchial
2 chr4:107031600-107052600 Weak transcription Fetal Thymus thymus
3 chr4:107031800-107039400 Weak transcription Brain Angular Gyrus brain
4 chr4:107031800-107053400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr4:107032000-107052200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr4:107032000-107058200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr4:107032200-107038400 Weak transcription Fetal Brain Male brain
8 chr4:107032600-107039600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr4:107033400-107039800 Weak transcription Muscle Satellite Cultured Cells --
10 chr4:107033400-107053000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr4:107033600-107052800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr4:107033600-107053400 Weak transcription Osteobl bone
13 chr4:107033800-107038200 Strong transcription Primary T cells fromperipheralblood blood
14 chr4:107033800-107038400 Strong transcription Primary T cells from cord blood blood
15 chr4:107033800-107039000 Weak transcription HSMMtube muscle
16 chr4:107033800-107053400 Weak transcription HSMM muscle
17 chr4:107034000-107038400 Strong transcription Primary T helper cells PMA-I stimulated --
18 chr4:107034200-107038600 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr4:107034200-107040200 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr4:107034200-107053400 Weak transcription Right Ventricle heart
21 chr4:107034800-107038400 Strong transcription Primary T regulatory cells fromperipheralblood blood
22 chr4:107034800-107041000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr4:107035000-107039400 Weak transcription Psoas Muscle Psoas
24 chr4:107035200-107038200 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr4:107035200-107038400 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr4:107035200-107057200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr4:107035400-107040400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr4:107035600-107039200 Weak transcription Fetal Brain Female brain
29 chr4:107035600-107083200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr4:107035800-107039000 Weak transcription Brain Germinal Matrix brain
31 chr4:107035800-107039200 Weak transcription Rectal Smooth Muscle rectum
32 chr4:107035800-107039200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr4:107035800-107040200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr4:107035800-107041000 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr4:107035800-107041600 Weak transcription Colonic Mucosa Colon
36 chr4:107035800-107043800 Weak transcription Thymus Thymus
37 chr4:107035800-107052200 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr4:107035800-107053000 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr4:107035800-107053000 Weak transcription Fetal Lung lung
40 chr4:107035800-107053200 Weak transcription Fetal Stomach stomach
41 chr4:107035800-107053200 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr4:107035800-107053400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr4:107035800-107053400 Weak transcription Lung lung
44 chr4:107035800-107053400 Weak transcription Pancreas Pancrea
45 chr4:107035800-107053600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr4:107035800-107053600 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr4:107036000-107053200 Weak transcription Brain Anterior Caudate brain
48 chr4:107036200-107039000 Weak transcription Fetal Muscle Trunk muscle
49 chr4:107036200-107040600 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr4:107036200-107052800 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015