Variant report
| Variant | rs12509366 |
|---|---|
| Chromosome Location | chr4:107003343-107003344 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:106984000-107010200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 2 | chr4:106985000-107011400 | Weak transcription | HepG2 | liver |
| 3 | chr4:106993000-107008800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 4 | chr4:106993200-107010000 | Weak transcription | Left Ventricle | heart |
| 5 | chr4:106993400-107010400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 6 | chr4:106993600-107010000 | Weak transcription | Right Ventricle | heart |
| 7 | chr4:106993800-107010800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 8 | chr4:106994600-107015000 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 9 | chr4:106994800-107011600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 10 | chr4:106995000-107004200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 11 | chr4:106995200-107010000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 12 | chr4:106995200-107011400 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr4:106995400-107004000 | Weak transcription | Fetal Stomach | stomach |
| 14 | chr4:106995400-107004200 | Weak transcription | Thymus | Thymus |
| 15 | chr4:106995400-107011000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 16 | chr4:106995400-107011000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 17 | chr4:106995600-107010400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 18 | chr4:106996000-107010800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 19 | chr4:106996200-107003800 | Weak transcription | Pancreas | Pancrea |
| 20 | chr4:106997200-107031000 | Weak transcription | Psoas Muscle | Psoas |
| 21 | chr4:106997400-107004000 | Weak transcription | Gastric | stomach |
| 22 | chr4:106998000-107004400 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
| 23 | chr4:106998000-107010000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 24 | chr4:106998600-107004600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 25 | chr4:106998600-107010200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 26 | chr4:106998600-107010600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 27 | chr4:106998600-107010800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 28 | chr4:106999000-107004000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 29 | chr4:106999000-107011000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 30 | chr4:106999000-107011800 | Weak transcription | Fetal Heart | heart |
| 31 | chr4:106999000-107012000 | Weak transcription | NHDF-Ad | bronchial |
| 32 | chr4:106999200-107010000 | Weak transcription | Fetal Brain Male | brain |
| 33 | chr4:106999200-107010400 | Weak transcription | HSMM | muscle |
| 34 | chr4:106999400-107004200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 35 | chr4:106999600-107004000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 36 | chr4:106999600-107004200 | Weak transcription | Fetal Intestine Large | intestine |
| 37 | chr4:107000000-107011400 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 38 | chr4:107000200-107006800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 39 | chr4:107000200-107010000 | Weak transcription | Brain Angular Gyrus | brain |
| 40 | chr4:107000400-107006000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 41 | chr4:107001000-107010200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 42 | chr4:107001200-107003800 | Weak transcription | Ovary | ovary |
| 43 | chr4:107001200-107004000 | Weak transcription | Esophagus | oesophagus |
| 44 | chr4:107001200-107004000 | Weak transcription | Fetal Intestine Small | intestine |
| 45 | chr4:107001200-107018600 | Weak transcription | HUVEC | blood vessel |
| 46 | chr4:107001600-107010200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 47 | chr4:107001600-107010200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 48 | chr4:107002200-107003600 | ZNF genes & repeats | Primary T cells from cord blood | blood |
| 49 | chr4:107002200-107003800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 50 | chr4:107002200-107003800 | Strong transcription | Brain Hippocampus Middle | brain |
