The 2.0 version of rSNPBase

Variant report

Variant rs7662592
Chromosome Location chr4:107004079-107004080
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:106984000-107010200 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr4:106985000-107011400 Weak transcription HepG2 liver
3 chr4:106993000-107008800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr4:106993200-107010000 Weak transcription Left Ventricle heart
5 chr4:106993400-107010400 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr4:106993600-107010000 Weak transcription Right Ventricle heart
7 chr4:106993800-107010800 Weak transcription Placenta Amnion Placenta Amnion
8 chr4:106994600-107015000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr4:106994800-107011600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr4:106995000-107004200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr4:106995200-107010000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr4:106995200-107011400 Weak transcription Colonic Mucosa Colon
13 chr4:106995400-107004200 Weak transcription Thymus Thymus
14 chr4:106995400-107011000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr4:106995400-107011000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr4:106995600-107010400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr4:106996000-107010800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr4:106997200-107031000 Weak transcription Psoas Muscle Psoas
19 chr4:106998000-107004400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
20 chr4:106998000-107010000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr4:106998600-107004600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr4:106998600-107010200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr4:106998600-107010600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr4:106998600-107010800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr4:106999000-107011000 Weak transcription Brain Cingulate Gyrus brain
26 chr4:106999000-107011800 Weak transcription Fetal Heart heart
27 chr4:106999000-107012000 Weak transcription NHDF-Ad bronchial
28 chr4:106999200-107010000 Weak transcription Fetal Brain Male brain
29 chr4:106999200-107010400 Weak transcription HSMM muscle
30 chr4:106999400-107004200 Weak transcription Fetal Muscle Trunk muscle
31 chr4:106999600-107004200 Weak transcription Fetal Intestine Large intestine
32 chr4:107000000-107011400 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr4:107000200-107006800 Weak transcription Brain Inferior Temporal Lobe brain
34 chr4:107000200-107010000 Weak transcription Brain Angular Gyrus brain
35 chr4:107000400-107006000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr4:107001000-107010200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr4:107001200-107018600 Weak transcription HUVEC blood vessel
38 chr4:107001600-107010200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr4:107001600-107010200 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr4:107002400-107004600 Strong transcription Stomach Smooth Muscle stomach
41 chr4:107002600-107004200 Strong transcription Primary T killer naive cells fromperipheralblood blood
42 chr4:107002600-107004600 Strong transcription Primary T helper naive cells fromperipheralblood blood
43 chr4:107002600-107008600 Weak transcription Primary B cells from cord blood blood
44 chr4:107002800-107004800 Weak transcription Fetal Lung lung
45 chr4:107002800-107006400 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr4:107002800-107009600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr4:107002800-107010000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr4:107002800-107010000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr4:107002800-107010000 Weak transcription Duodenum Mucosa Duodenum
50 chr4:107002800-107011400 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015