Variant report

Variant	rs7669087
Chromosome Location	chr4:107032880-107032881
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 245 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:239)

rs_ID	r²[population]
rs10002288	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10018910	0.95[CEU][hapmap];0.84[TSI][hapmap];0.83[EUR][1000 genomes]
rs10025052	0.99[ASN][1000 genomes]
rs10030019	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10084928	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.97[TSI][hapmap];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10433894	0.95[ASN][1000 genomes]
rs10516532	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[ASN][1000 genomes]
rs10516533	0.81[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[ASN][1000 genomes]
rs10516534	0.95[ASN][1000 genomes]
rs11097912	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11097914	1.00[ASN][1000 genomes]
rs11097916	1.00[ASN][1000 genomes]
rs11097917	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11097919	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];1.00[ASN][1000 genomes]
rs11097924	0.81[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.95[ASN][1000 genomes]
rs11097925	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs11097927	0.95[ASN][1000 genomes]
rs11097928	0.95[ASN][1000 genomes]
rs11097929	0.95[ASN][1000 genomes]
rs11725065	0.85[AMR][1000 genomes]
rs11725254	0.82[EUR][1000 genomes]
rs11930970	0.95[ASN][1000 genomes]
rs11940160	0.95[ASN][1000 genomes]
rs11942153	0.99[ASN][1000 genomes]
rs11947335	0.95[ASN][1000 genomes]
rs12499891	1.00[ASN][1000 genomes]
rs12500228	0.98[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12500295	0.95[ASN][1000 genomes]
rs12500331	0.88[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs12500775	0.93[ASN][1000 genomes]
rs12501801	0.95[ASN][1000 genomes]
rs12502764	0.95[ASN][1000 genomes]
rs12503753	0.97[ASN][1000 genomes]
rs12504704	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12504721	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[ASN][1000 genomes]
rs12505689	0.96[ASN][1000 genomes]
rs12506062	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];1.00[ASN][1000 genomes]
rs12506658	1.00[ASN][1000 genomes]
rs12507429	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.99[ASN][1000 genomes]
rs12507867	0.96[ASN][1000 genomes]
rs12507874	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12508432	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12508552	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12509366	1.00[ASN][1000 genomes]
rs12509640	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.81[GIH][hapmap];0.83[JPT][hapmap];0.91[ASN][1000 genomes]
rs12509865	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12510058	0.95[ASN][1000 genomes]
rs12510966	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12511305	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.96[ASN][1000 genomes]
rs12512683	1.00[ASN][1000 genomes]
rs12512877	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs12512903	0.81[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.94[ASN][1000 genomes]
rs12512966	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];1.00[ASN][1000 genomes]
rs12513317	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12513345	0.91[CEU][hapmap]
rs12639678	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12639869	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[ASN][1000 genomes]
rs12641015	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.95[ASN][1000 genomes]
rs12641037	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs12642059	0.90[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12642227	1.00[ASN][1000 genomes]
rs12642454	0.95[ASN][1000 genomes]
rs12642900	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12643397	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12644259	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[ASN][1000 genomes]
rs12644596	0.93[ASN][1000 genomes]
rs12645255	0.93[ASN][1000 genomes]
rs12645271	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12645698	0.91[ASN][1000 genomes]
rs12645743	0.90[ASN][1000 genomes]
rs12646263	0.97[ASN][1000 genomes]
rs12646485	1.00[ASN][1000 genomes]
rs12647078	1.00[ASN][1000 genomes]
rs12649709	0.95[ASN][1000 genomes]
rs12651360	0.95[ASN][1000 genomes]
rs13534	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs17036613	0.92[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];0.89[JPT][hapmap];0.82[MEX][hapmap];0.95[ASN][1000 genomes]
rs17259572	0.99[ASN][1000 genomes]
rs17272618	0.95[CEU][hapmap];0.84[TSI][hapmap];0.83[EUR][1000 genomes]
rs17273093	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17273445	1.00[ASN][1000 genomes]
rs17274017	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs17274248	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs17333287	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs17333732	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs17333879	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs17333899	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.93[ASN][1000 genomes]
rs1988695	0.95[ASN][1000 genomes]
rs2290607	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs28391259	1.00[ASN][1000 genomes]
rs28507027	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28765420	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28787305	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28805707	0.83[EUR][1000 genomes]
rs28814088	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28822186	1.00[ASN][1000 genomes]
rs28866820	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28868894	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28875879	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28897193	1.00[ASN][1000 genomes]
rs34193646	0.95[ASN][1000 genomes]
rs34899289	0.95[ASN][1000 genomes]
rs34961213	0.95[ASN][1000 genomes]
rs35518913	1.00[ASN][1000 genomes]
rs3737497	0.95[ASN][1000 genomes]
rs3737498	0.95[ASN][1000 genomes]
rs3762945	0.95[ASN][1000 genomes]
rs3762946	0.93[ASN][1000 genomes]
rs3762947	0.93[ASN][1000 genomes]
rs3775090	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[ASN][1000 genomes]
rs3792718	0.95[ASN][1000 genomes]
rs3805405	0.95[ASN][1000 genomes]
rs3805407	0.95[ASN][1000 genomes]
rs3805409	0.95[ASN][1000 genomes]
rs3805410	0.94[ASN][1000 genomes]
rs3805411	0.95[ASN][1000 genomes]
rs4323181	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4337798	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4337799	1.00[ASN][1000 genomes]
rs4339284	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4422480	1.00[ASN][1000 genomes]
rs4429790	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[ASN][1000 genomes]
rs4458525	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4466113	1.00[ASN][1000 genomes]
rs4481295	0.90[ASN][1000 genomes]
rs4521418	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4607300	0.93[ASN][1000 genomes]
rs4645291	0.95[ASN][1000 genomes]
rs55633564	1.00[ASN][1000 genomes]
rs55634475	1.00[ASN][1000 genomes]
rs55710349	0.95[ASN][1000 genomes]
rs55726133	0.95[ASN][1000 genomes]
rs55753411	0.95[ASN][1000 genomes]
rs55833794	1.00[ASN][1000 genomes]
rs56009469	0.95[ASN][1000 genomes]
rs56135499	1.00[ASN][1000 genomes]
rs56222430	0.91[ASN][1000 genomes]
rs56231393	0.95[ASN][1000 genomes]
rs56260521	1.00[ASN][1000 genomes]
rs56329826	1.00[ASN][1000 genomes]
rs56333662	0.95[ASN][1000 genomes]
rs56341229	1.00[ASN][1000 genomes]
rs56775039	0.95[ASN][1000 genomes]
rs56833325	0.90[ASN][1000 genomes]
rs57246774	1.00[ASN][1000 genomes]
rs59228887	0.95[ASN][1000 genomes]
rs59784613	1.00[ASN][1000 genomes]
rs60538413	0.89[ASN][1000 genomes]
rs61256759	0.95[ASN][1000 genomes]
rs61544154	0.95[ASN][1000 genomes]
rs62321365	0.98[ASN][1000 genomes]
rs6533240	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6533243	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[ASN][1000 genomes]
rs6533245	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.95[ASN][1000 genomes]
rs6533246	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs6810877	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6814166	0.95[ASN][1000 genomes]
rs6815014	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6816614	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6816698	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.93[ASN][1000 genomes]
rs6818197	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];1.00[ASN][1000 genomes]
rs6818626	1.00[ASN][1000 genomes]
rs6819224	0.95[ASN][1000 genomes]
rs6819742	0.95[ASN][1000 genomes]
rs6822692	1.00[ASN][1000 genomes]
rs6823347	0.99[ASN][1000 genomes]
rs6824682	1.00[ASN][1000 genomes]
rs6827816	0.93[ASN][1000 genomes]
rs6828362	1.00[ASN][1000 genomes]
rs6828660	0.95[ASN][1000 genomes]
rs6829795	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6831032	0.95[ASN][1000 genomes]
rs6831665	0.93[ASN][1000 genomes]
rs6835216	1.00[CEU][hapmap];0.92[CHB][hapmap];0.94[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6838283	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs6842919	0.97[ASN][1000 genomes]
rs6843331	0.97[ASN][1000 genomes]
rs6843870	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[ASN][1000 genomes]
rs6844105	0.95[CEU][hapmap];0.83[EUR][1000 genomes]
rs6844324	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6846579	0.83[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6849341	0.95[ASN][1000 genomes]
rs6849573	0.86[ASW][hapmap];0.90[CEU][hapmap];0.83[LWK][hapmap];0.84[TSI][hapmap];0.83[EUR][1000 genomes]
rs6853554	0.91[CEU][hapmap];0.84[TSI][hapmap]
rs6856408	0.95[ASN][1000 genomes]
rs6858391	0.95[ASN][1000 genomes]
rs72489522	1.00[ASN][1000 genomes]
rs72677306	1.00[ASN][1000 genomes]
rs72876575	0.95[ASN][1000 genomes]
rs72876590	0.95[ASN][1000 genomes]
rs72876592	0.95[ASN][1000 genomes]
rs72876594	0.95[ASN][1000 genomes]
rs72878537	0.93[ASN][1000 genomes]
rs72893620	0.95[ASN][1000 genomes]
rs7340989	0.93[ASN][1000 genomes]
rs73839422	0.95[ASN][1000 genomes]
rs7655054	1.00[ASN][1000 genomes]
rs7657962	0.83[CEU][hapmap];0.92[CHB][hapmap];0.95[CHD][hapmap];0.81[GIH][hapmap];0.94[JPT][hapmap];0.97[ASN][1000 genomes]
rs7657975	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7658011	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7658701	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7661499	0.93[ASN][1000 genomes]
rs7661565	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7662219	0.81[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[ASN][1000 genomes]
rs7662291	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs7662395	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[ASN][1000 genomes]
rs7662592	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7662806	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7662836	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7664032	1.00[ASN][1000 genomes]
rs7664188	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7665946	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[ASN][1000 genomes]
rs7667719	0.95[ASN][1000 genomes]
rs7668477	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs7669212	0.95[ASN][1000 genomes]
rs7671145	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7673949	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[ASN][1000 genomes]
rs7674381	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7674460	0.95[ASN][1000 genomes]
rs7674466	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7674796	0.83[ASN][1000 genomes]
rs7674931	0.95[ASN][1000 genomes]
rs7675728	0.96[ASN][1000 genomes]
rs7677248	0.99[ASN][1000 genomes]
rs7678229	0.81[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[ASN][1000 genomes]
rs7678749	0.95[ASN][1000 genomes]
rs7678847	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs7678943	0.95[ASN][1000 genomes]
rs7681257	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7688008	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs7688411	0.81[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[ASN][1000 genomes]
rs7692069	0.95[ASN][1000 genomes]
rs7697996	0.95[ASN][1000 genomes]
rs7698386	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7699768	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9684658	0.95[ASN][1000 genomes]
rs9685018	0.97[ASN][1000 genomes]
rs9685464	1.00[ASN][1000 genomes]
rs9991091	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1799793	chr4:107000462-107062671	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	esv1801716	chr4:107000462-107062671	Strong transcription Weak transcription ZNF genes & repeats Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv1849248	chr4:107000462-107062671	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	esv1850577	chr4:107000462-107062671	ZNF genes & repeats Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv511247	chr4:107022702-107065220	Weak transcription Strong transcription ZNF genes & repeats Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	nsv879701	chr4:107024776-107163128	ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs7669087	TBCK	cis	Lymphoblastoid	GTEx
rs7669087	TBCK	cis	lymphoblastoid	seeQTL
rs7669087	ELOVL6	cis	cerebellum	SCAN
rs7669087	TBCK	cis	parietal	SCAN
rs7669087	SEMA7A	trans	parietal	SCAN
rs7669087	MGC16169	cis	multi-tissue	Pritchard

Chromatin state (count:76 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:107012600-107033200	Weak transcription	Osteobl	bone
2	chr4:107012600-107033800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr4:107012600-107034400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr4:107012600-107038400	Weak transcription	NHDF-Ad	bronchial
5	chr4:107012800-107033400	Weak transcription	Rectal Smooth Muscle	rectum
6	chr4:107014000-107034600	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr4:107026200-107033600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
8	chr4:107026800-107035800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr4:107029000-107037800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr4:107029400-107034400	ZNF genes & repeats	Fetal Muscle Leg	muscle
11	chr4:107029800-107033400	ZNF genes & repeats	Brain Germinal Matrix	brain
12	chr4:107029800-107034000	ZNF genes & repeats	Adipose Nuclei	Adipose
13	chr4:107029800-107035200	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
14	chr4:107029800-107038000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr4:107030000-107033800	ZNF genes & repeats	Brain Substantia Nigra	brain
16	chr4:107030000-107035400	ZNF genes & repeats	Primary hematopoietic stem cells	blood
17	chr4:107030000-107035800	ZNF genes & repeats	Primary B cells from peripheral blood	blood
18	chr4:107030200-107033400	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr4:107030200-107034400	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
20	chr4:107030200-107036200	ZNF genes & repeats	Duodenum Mucosa	Duodenum
21	chr4:107030400-107034000	ZNF genes & repeats	Fetal Lung	lung
22	chr4:107030600-107033800	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
23	chr4:107030600-107033800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr4:107030600-107035200	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
25	chr4:107030600-107035800	ZNF genes & repeats	Liver	Liver
26	chr4:107030800-107033400	ZNF genes & repeats	Fetal Adrenal Gland	Adrenal Gland
27	chr4:107030800-107034200	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
28	chr4:107030800-107037800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr4:107031000-107033400	ZNF genes & repeats	Psoas Muscle	Psoas
30	chr4:107031000-107033400	ZNF genes & repeats	Rectal Mucosa Donor 29	rectum
31	chr4:107031000-107033800	ZNF genes & repeats	Skeletal Muscle Female	skeletal muscle
32	chr4:107031000-107034000	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
33	chr4:107031000-107034200	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr4:107031000-107034200	Strong transcription	Thymus	Thymus
35	chr4:107031000-107034200	ZNF genes & repeats	HepG2	liver
36	chr4:107031000-107034400	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
37	chr4:107031000-107034800	ZNF genes & repeats	Ovary	ovary
38	chr4:107031000-107036200	ZNF genes & repeats	Fetal Intestine Small	intestine
39	chr4:107031200-107033800	ZNF genes & repeats	Brain Cingulate Gyrus	brain
40	chr4:107031200-107034000	ZNF genes & repeats	Stomach Smooth Muscle	stomach
41	chr4:107031200-107034400	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
42	chr4:107031200-107034400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
43	chr4:107031200-107034800	ZNF genes & repeats	Primary B cells from cord blood	blood
44	chr4:107031200-107035200	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr4:107031200-107035800	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon
46	chr4:107031400-107034200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
47	chr4:107031600-107033200	Strong transcription	Fetal Kidney	kidney
48	chr4:107031600-107033800	ZNF genes & repeats	Primary T cells from cord blood	blood
49	chr4:107031600-107052600	Weak transcription	Fetal Thymus	thymus
50	chr4:107031800-107039400	Weak transcription	Brain Angular Gyrus	brain

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