Variant report
| Variant | rs12643397 |
|---|---|
| Chromosome Location | chr4:107054976-107054977 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:107032000-107058200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 2 | chr4:107035200-107057200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 3 | chr4:107035600-107083200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 4 | chr4:107037600-107056200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 5 | chr4:107037600-107060600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 6 | chr4:107037600-107061600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 7 | chr4:107037600-107066400 | Weak transcription | Fetal Kidney | kidney |
| 8 | chr4:107037800-107077400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 9 | chr4:107038000-107055400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 10 | chr4:107038000-107056800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 11 | chr4:107038000-107112000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 12 | chr4:107053000-107055200 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 13 | chr4:107053200-107055200 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 14 | chr4:107053400-107055200 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 15 | chr4:107053400-107056200 | Strong transcription | Ovary | ovary |
| 16 | chr4:107053600-107055200 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 17 | chr4:107053600-107067600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 18 | chr4:107053800-107058200 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 19 | chr4:107053800-107061400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 20 | chr4:107053800-107064200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 21 | chr4:107053800-107070000 | Weak transcription | Brain Hippocampus Middle | brain |
| 22 | chr4:107053800-107080000 | Weak transcription | Right Ventricle | heart |
| 23 | chr4:107053800-107083400 | Weak transcription | HSMM | muscle |
| 24 | chr4:107053800-107083800 | Weak transcription | Left Ventricle | heart |
| 25 | chr4:107053800-107101600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 26 | chr4:107054000-107055200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 27 | chr4:107054000-107055400 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 28 | chr4:107054000-107055600 | Weak transcription | Primary B cells from cord blood | blood |
| 29 | chr4:107054000-107055600 | Weak transcription | Primary T cells from cord blood | blood |
| 30 | chr4:107054000-107055600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 31 | chr4:107054000-107055600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 32 | chr4:107054000-107057600 | Weak transcription | Brain Substantia Nigra | brain |
| 33 | chr4:107054000-107057800 | Weak transcription | Fetal Thymus | thymus |
| 34 | chr4:107054000-107057800 | Weak transcription | Dnd41 | blood |
| 35 | chr4:107054000-107063400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 36 | chr4:107054000-107066400 | Weak transcription | Liver | Liver |
| 37 | chr4:107054000-107067000 | Weak transcription | Fetal Lung | lung |
| 38 | chr4:107054000-107067000 | Weak transcription | Fetal Muscle Leg | muscle |
| 39 | chr4:107054000-107067800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 40 | chr4:107054000-107070000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 41 | chr4:107054000-107070400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 42 | chr4:107054000-107074400 | Weak transcription | HepG2 | liver |
| 43 | chr4:107054000-107076800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 44 | chr4:107054000-107077000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 45 | chr4:107054000-107077000 | Weak transcription | Fetal Intestine Large | intestine |
| 46 | chr4:107054000-107077400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 47 | chr4:107054000-107077400 | Weak transcription | Aorta | Aorta |
| 48 | chr4:107054000-107077400 | Weak transcription | Fetal Stomach | stomach |
| 49 | chr4:107054000-107077400 | Weak transcription | Lung | lung |
| 50 | chr4:107054000-107081600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
