The 2.0 version of rSNPBase

Variant report

Variant rs12647078
Chromosome Location chr4:107084333-107084334
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:107038000-107112000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr4:107053800-107101600 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr4:107054000-107091000 Weak transcription Stomach Smooth Muscle stomach
4 chr4:107054000-107113600 Weak transcription Brain Anterior Caudate brain
5 chr4:107066400-107151200 Weak transcription Colon Smooth Muscle Colon
6 chr4:107071800-107176400 Weak transcription Rectal Smooth Muscle rectum
7 chr4:107073000-107086800 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr4:107074200-107114400 Weak transcription NHDF-Ad bronchial
9 chr4:107074600-107111800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr4:107075200-107091000 Weak transcription Primary T cells fromperipheralblood blood
11 chr4:107075800-107114000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr4:107075800-107118200 Weak transcription Brain Substantia Nigra brain
13 chr4:107075800-107129600 Weak transcription Spleen Spleen
14 chr4:107076400-107114200 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr4:107077000-107089600 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr4:107078000-107107800 Weak transcription HSMMtube muscle
17 chr4:107078200-107116000 Weak transcription Colonic Mucosa Colon
18 chr4:107078800-107112200 Weak transcription Osteobl bone
19 chr4:107078800-107114200 Weak transcription Placenta Amnion Placenta Amnion
20 chr4:107082400-107085000 Strong transcription Fetal Thymus thymus
21 chr4:107082600-107084800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr4:107082600-107085600 Strong transcription Primary B cells from cord blood blood
23 chr4:107082800-107085400 Strong transcription Primary T cells from cord blood blood
24 chr4:107082800-107086800 Weak transcription Fetal Heart heart
25 chr4:107083000-107084600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
26 chr4:107083000-107084800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
27 chr4:107083000-107085000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr4:107083200-107084400 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
29 chr4:107083200-107084400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
30 chr4:107083200-107084400 ZNF genes & repeats Fetal Intestine Small intestine
31 chr4:107083200-107085000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
32 chr4:107083200-107085200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:107083200-107090400 Weak transcription Fetal Brain Male brain
34 chr4:107083200-107173400 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr4:107083600-107084600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr4:107083600-107084600 ZNF genes & repeats Primary B cells from peripheral blood blood
37 chr4:107083600-107084600 Strong transcription Fetal Adrenal Gland Adrenal Gland
38 chr4:107083600-107085000 Strong transcription Fetal Intestine Large intestine
39 chr4:107083600-107085400 Strong transcription Fetal Kidney kidney
40 chr4:107083800-107084400 Strong transcription Primary T regulatory cells fromperipheralblood blood
41 chr4:107083800-107085600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr4:107083800-107114200 Weak transcription Brain Inferior Temporal Lobe brain
43 chr4:107083800-107134000 Weak transcription Right Ventricle heart
44 chr4:107083800-107164800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr4:107084000-107084800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr4:107084000-107084800 Strong transcription Fetal Muscle Trunk muscle
47 chr4:107084000-107084800 Weak transcription Dnd41 blood
48 chr4:107084000-107085600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr4:107084000-107086400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr4:107084000-107086600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015