Variant report

Variant	rs12663756
Chromosome Location	chr6:133764851-133764852
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs11961662	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12660521	0.95[ASN][1000 genomes]
rs12661876	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12664324	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12665147	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12665159	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12665690	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17062561	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2076255	0.97[EUR][1000 genomes]
rs2076256	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28360637	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3756873	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3777853	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3777856	0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs3777860	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3798355	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs41286198	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs41286208	1.00[AFR][1000 genomes]
rs4895966	0.89[EUR][1000 genomes]
rs4895967	0.97[EUR][1000 genomes]
rs55963818	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56088418	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs56140782	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs56182562	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56241016	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs58512026	0.92[ASN][1000 genomes]
rs6922694	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6933900	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73544919	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73544934	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73544945	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs970984	0.94[ASN][1000 genomes]
rs970985	0.94[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133749800-133777600	Weak transcription	Hela-S3	cervix
2	chr6:133756800-133772600	Weak transcription	Right Atrium	heart
3	chr6:133758400-133769000	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr6:133761000-133765400	Weak transcription	Psoas Muscle	Psoas

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links