The 2.0 version of rSNPBase

Variant report

Variant rs13059347
Chromosome Location chr3:17093626-17093627
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17077400-17094600 Weak transcription Psoas Muscle Psoas
2 chr3:17081200-17111400 Weak transcription Placenta Amnion Placenta Amnion
3 chr3:17082600-17097000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr3:17083000-17096600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr3:17083000-17097200 Weak transcription NH-A brain
6 chr3:17083000-17109600 Weak transcription Fetal Intestine Large intestine
7 chr3:17083200-17111600 Weak transcription Stomach Mucosa stomach
8 chr3:17084000-17094800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr3:17085000-17095800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr3:17085800-17094000 Weak transcription Aorta Aorta
11 chr3:17085800-17112200 Weak transcription Gastric stomach
12 chr3:17086000-17094600 Weak transcription Brain Germinal Matrix brain
13 chr3:17086000-17096000 Weak transcription Right Ventricle heart
14 chr3:17086000-17096400 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr3:17087400-17095200 Weak transcription Rectal Smooth Muscle rectum
16 chr3:17087600-17094600 Weak transcription Fetal Stomach stomach
17 chr3:17088600-17094000 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr3:17089000-17094600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr3:17089400-17109000 Weak transcription Dnd41 blood
20 chr3:17089400-17135000 Weak transcription Pancreas Pancrea
21 chr3:17089600-17097000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr3:17089600-17111000 Weak transcription H1 Cell Line embryonic stem cell
23 chr3:17089800-17094000 Weak transcription Ovary ovary
24 chr3:17089800-17110400 Weak transcription Fetal Thymus thymus
25 chr3:17089800-17112200 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr3:17089800-17116000 Weak transcription Thymus Thymus
27 chr3:17090000-17095800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr3:17090400-17094600 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr3:17090400-17094800 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr3:17090400-17096000 Weak transcription Fetal Heart heart
31 chr3:17090400-17096400 Weak transcription Osteobl bone
32 chr3:17090400-17097000 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr3:17090400-17097000 Weak transcription Left Ventricle heart
34 chr3:17090400-17110400 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr3:17090600-17093800 Weak transcription Primary B cells from peripheral blood blood
36 chr3:17090600-17094000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr3:17090600-17094000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr3:17090600-17096800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr3:17090600-17110400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr3:17090800-17094600 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr3:17090800-17094600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr3:17091000-17094600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr3:17091200-17095000 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr3:17091400-17095800 Enhancers Primary monocytes fromperipheralblood blood
45 chr3:17091600-17103800 Strong transcription Primary T cells from cord blood blood
46 chr3:17092000-17109200 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr3:17092200-17095600 Strong transcription Placenta Placenta
48 chr3:17092200-17096000 Enhancers Monocytes-CD14+_RO01746 blood
49 chr3:17092200-17096800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr3:17092200-17109000 Weak transcription Liver Liver

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Last update: Aug 31, 2015