The 2.0 version of rSNPBase

Variant report

Variant rs4234539
Chromosome Location chr3:17064125-17064126
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17051600-17075000 Weak transcription Fetal Brain Male brain
2 chr3:17053200-17069000 Weak transcription Aorta Aorta
3 chr3:17053200-17069000 Weak transcription Fetal Lung lung
4 chr3:17053400-17072600 Weak transcription Ovary ovary
5 chr3:17053600-17064400 Weak transcription Spleen Spleen
6 chr3:17053600-17071000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr3:17053600-17076200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr3:17053600-17080600 Weak transcription Fetal Muscle Leg muscle
9 chr3:17053800-17068400 Weak transcription Adipose Nuclei Adipose
10 chr3:17053800-17086800 Weak transcription Fetal Stomach stomach
11 chr3:17055000-17066200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr3:17055000-17077000 Weak transcription Fetal Brain Female brain
13 chr3:17055200-17072000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr3:17055400-17070600 Weak transcription Gastric stomach
15 chr3:17055400-17074200 Weak transcription Brain Anterior Caudate brain
16 chr3:17055400-17088800 Weak transcription Thymus Thymus
17 chr3:17055600-17079800 Weak transcription Small Intestine intestine
18 chr3:17055800-17087800 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr3:17057200-17066800 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr3:17057400-17068400 Weak transcription Liver Liver
21 chr3:17057400-17076200 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr3:17057600-17080600 Weak transcription Duodenum Mucosa Duodenum
23 chr3:17058200-17066000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr3:17058200-17074000 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr3:17058400-17064400 Weak transcription Placenta Placenta
26 chr3:17058600-17071600 Weak transcription Fetal Heart heart
27 chr3:17058600-17077000 Weak transcription Right Ventricle heart
28 chr3:17058600-17082400 Weak transcription Fetal Intestine Large intestine
29 chr3:17059800-17073000 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr3:17060000-17064400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr3:17060000-17066200 Weak transcription Left Ventricle heart
32 chr3:17060000-17069000 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr3:17060000-17069000 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr3:17060000-17069000 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr3:17060000-17070200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr3:17060000-17072800 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr3:17060000-17074600 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr3:17060000-17082200 Weak transcription Fetal Intestine Small intestine
39 chr3:17060000-17088600 Weak transcription Pancreas Pancrea
40 chr3:17060200-17081000 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr3:17060800-17064400 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr3:17061800-17073200 Enhancers Primary T helper cells PMA-I stimulated --
43 chr3:17062400-17065000 Enhancers Primary T helper cells fromperipheralblood blood
44 chr3:17062400-17065400 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr3:17062800-17065200 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr3:17062800-17065200 Enhancers Primary T killer memory cells from peripheral blood blood
47 chr3:17062800-17066000 Strong transcription Primary neutrophils fromperipheralblood blood
48 chr3:17062800-17066400 Enhancers Primary T helper 17 cells PMA-I stimulated --
49 chr3:17062800-17066600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr3:17062800-17066800 Enhancers Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015