The 2.0 version of rSNPBase

Variant report

Variant rs55748719
Chromosome Location chr3:17091601-17091602
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17070000-17093600 Weak transcription Fetal Lung lung
2 chr3:17073000-17093000 Weak transcription Spleen Spleen
3 chr3:17077400-17094600 Weak transcription Psoas Muscle Psoas
4 chr3:17081200-17111400 Weak transcription Placenta Amnion Placenta Amnion
5 chr3:17082400-17092800 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr3:17082600-17097000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr3:17083000-17096600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr3:17083000-17097200 Weak transcription NH-A brain
9 chr3:17083000-17109600 Weak transcription Fetal Intestine Large intestine
10 chr3:17083200-17111600 Weak transcription Stomach Mucosa stomach
11 chr3:17084000-17094800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
12 chr3:17085000-17095800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr3:17085800-17094000 Weak transcription Aorta Aorta
14 chr3:17085800-17112200 Weak transcription Gastric stomach
15 chr3:17086000-17094600 Weak transcription Brain Germinal Matrix brain
16 chr3:17086000-17096000 Weak transcription Right Ventricle heart
17 chr3:17086000-17096400 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr3:17087400-17095200 Weak transcription Rectal Smooth Muscle rectum
19 chr3:17087600-17094600 Weak transcription Fetal Stomach stomach
20 chr3:17088600-17092200 Strong transcription Liver Liver
21 chr3:17088600-17094000 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr3:17089000-17094600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr3:17089200-17092200 ZNF genes & repeats GM12878-XiMat blood
24 chr3:17089400-17092600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr3:17089400-17109000 Weak transcription Dnd41 blood
26 chr3:17089400-17135000 Weak transcription Pancreas Pancrea
27 chr3:17089600-17097000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr3:17089600-17111000 Weak transcription H1 Cell Line embryonic stem cell
29 chr3:17089800-17094000 Weak transcription Ovary ovary
30 chr3:17089800-17110400 Weak transcription Fetal Thymus thymus
31 chr3:17089800-17112200 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr3:17089800-17116000 Weak transcription Thymus Thymus
33 chr3:17090000-17095800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr3:17090200-17092200 Weak transcription Placenta Placenta
35 chr3:17090400-17092800 Weak transcription Primary T cells fromperipheralblood blood
36 chr3:17090400-17094600 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr3:17090400-17094800 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr3:17090400-17096000 Weak transcription Fetal Heart heart
39 chr3:17090400-17096400 Weak transcription Osteobl bone
40 chr3:17090400-17097000 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr3:17090400-17097000 Weak transcription Left Ventricle heart
42 chr3:17090400-17110400 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr3:17090600-17092200 Strong transcription Primary B cells from cord blood blood
44 chr3:17090600-17093000 Weak transcription Primary hematopoietic stem cells blood
45 chr3:17090600-17093000 Weak transcription A549 lung
46 chr3:17090600-17093400 Weak transcription Duodenum Mucosa Duodenum
47 chr3:17090600-17093800 Weak transcription Primary B cells from peripheral blood blood
48 chr3:17090600-17094000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr3:17090600-17094000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr3:17090600-17096800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015