Variant report

Variant	rs13210417
Chromosome Location	chr6:46074143-46074144
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1011370	0.81[CEU][hapmap];0.85[CHB][hapmap]
rs1047153	0.84[CEU][hapmap];0.85[CHB][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1048077	0.88[EUR][1000 genomes]
rs1076738	0.80[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs3734208	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4496799	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs5011271	0.84[CEU][hapmap];0.85[CHB][hapmap];0.83[AMR][1000 genomes]
rs6900403	0.94[ASN][1000 genomes]
rs6921636	0.96[ASN][1000 genomes]
rs6921826	0.82[AFR][1000 genomes]
rs7754915	0.80[CEU][hapmap];0.91[EUR][1000 genomes]
rs7760042	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7762549	0.88[ASN][1000 genomes]
rs7766019	0.85[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7772635	0.96[EUR][1000 genomes]
rs9367235	0.80[JPT][hapmap];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9369597	0.80[CEU][hapmap]
rs9369598	1.00[ASN][1000 genomes]
rs9381428	0.80[AMR][1000 genomes]
rs9395154	1.00[ASN][1000 genomes]
rs9395156	0.84[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9472686	1.00[ASN][1000 genomes]
rs9472701	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9472703	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9472712	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs976083	0.85[AFR][1000 genomes]
rs993632	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs995563	0.85[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs13210417	ENPP4	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:46063000-46080800	Weak transcription	Primary T cells from cord blood	blood
2	chr6:46066800-46076800	Weak transcription	Pancreas	Pancrea
3	chr6:46071600-46086800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
4	chr6:46073400-46074200	Enhancers	Fetal Muscle Leg	muscle
5	chr6:46073800-46074200	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr6:46073800-46075000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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