The 2.0 version of rSNPBase

Variant report

Variant rs1412931
Chromosome Location chr1:112954964-112954965
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:112940000-112956400 Weak transcription Left Ventricle heart
2 chr1:112940000-112961400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:112940200-112958400 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:112940600-112958800 Weak transcription Colonic Mucosa Colon
5 chr1:112940600-112962000 Weak transcription Psoas Muscle Psoas
6 chr1:112940800-112955000 Weak transcription Adipose Nuclei Adipose
7 chr1:112941200-112955000 Weak transcription Duodenum Mucosa Duodenum
8 chr1:112941200-112955000 Weak transcription Fetal Kidney kidney
9 chr1:112941400-112956400 Weak transcription Fetal Intestine Small intestine
10 chr1:112941400-112959400 Weak transcription Brain Germinal Matrix brain
11 chr1:112941600-112959600 Weak transcription Fetal Brain Female brain
12 chr1:112942400-112988200 Weak transcription Small Intestine intestine
13 chr1:112942600-112955400 Weak transcription Fetal Intestine Large intestine
14 chr1:112942600-112966400 Weak transcription Spleen Spleen
15 chr1:112942600-112967000 Weak transcription Pancreas Pancrea
16 chr1:112944800-112959000 Weak transcription Brain Hippocampus Middle brain
17 chr1:112945000-112966400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:112946800-112959000 Weak transcription GM12878-XiMat blood
19 chr1:112946800-112960800 Weak transcription Brain Substantia Nigra brain
20 chr1:112946800-112970600 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:112947000-112956800 Weak transcription Brain Anterior Caudate brain
22 chr1:112947200-112956600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr1:112947200-112958200 Weak transcription Right Ventricle heart
24 chr1:112947200-112959000 Weak transcription Brain Inferior Temporal Lobe brain
25 chr1:112947200-112959200 Weak transcription Ovary ovary
26 chr1:112947200-112961800 Weak transcription A549 lung
27 chr1:112947200-112961800 Weak transcription HepG2 liver
28 chr1:112947200-112971200 Weak transcription Aorta Aorta
29 chr1:112947200-112981000 Weak transcription Rectal Smooth Muscle rectum
30 chr1:112947400-112955600 Weak transcription H1 Cell Line embryonic stem cell
31 chr1:112947400-112965600 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr1:112947600-112955200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr1:112947600-112955400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:112948000-112958600 Weak transcription HMEC breast
35 chr1:112948200-112955200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:112948600-112955000 Weak transcription HSMMtube muscle
37 chr1:112948600-112955800 Weak transcription Placenta Placenta
38 chr1:112949200-112958400 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr1:112949200-112960600 Weak transcription Brain Angular Gyrus brain
40 chr1:112949200-112963200 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr1:112949200-112966400 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr1:112949800-112958800 Weak transcription Brain Cingulate Gyrus brain
43 chr1:112950000-112957000 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr1:112950000-112960000 Weak transcription Fetal Lung lung
45 chr1:112950200-112956800 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr1:112950200-112959400 Weak transcription Fetal Brain Male brain
47 chr1:112950400-112956800 Weak transcription Colon Smooth Muscle Colon
48 chr1:112951000-112956800 Weak transcription Lung lung
49 chr1:112951000-112957600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr1:112951200-112969000 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015