The 2.0 version of rSNPBase

Variant report

Variant rs2492514
Chromosome Location chr1:112962891-112962892
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:112942400-112988200 Weak transcription Small Intestine intestine
2 chr1:112942600-112966400 Weak transcription Spleen Spleen
3 chr1:112942600-112967000 Weak transcription Pancreas Pancrea
4 chr1:112945000-112966400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:112946800-112970600 Weak transcription H9 Cell Line embryonic stem cell
6 chr1:112947200-112971200 Weak transcription Aorta Aorta
7 chr1:112947200-112981000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:112947400-112965600 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:112949200-112963200 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr1:112949200-112966400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr1:112951200-112969000 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr1:112951600-112968800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:112952000-112969600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:112952400-112990600 Weak transcription Esophagus oesophagus
15 chr1:112952600-112963400 Weak transcription Stomach Mucosa stomach
16 chr1:112952600-112981400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr1:112953800-112966400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:112954400-112963200 Weak transcription Primary hematopoietic stem cells blood
19 chr1:112954400-112963400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:112954400-112963800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:112954400-112964000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:112954400-112964600 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr1:112954400-112967400 Strong transcription Osteobl bone
24 chr1:112956200-112963200 Weak transcription NHEK skin
25 chr1:112957400-112986600 Weak transcription NHLF lung
26 chr1:112957600-112967400 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr1:112957600-112997600 Weak transcription Brain Anterior Caudate brain
28 chr1:112958000-112964600 Strong transcription Muscle Satellite Cultured Cells --
29 chr1:112958200-112967600 Weak transcription Primary monocytes fromperipheralblood blood
30 chr1:112958600-112971000 Weak transcription Right Ventricle heart
31 chr1:112958600-112979000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:112959000-112965800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:112959600-112965400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:112959600-112973200 Weak transcription Lung lung
35 chr1:112959600-112991600 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr1:112959800-112972000 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr1:112959800-112973400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:112959800-112992800 Weak transcription Fetal Muscle Trunk muscle
39 chr1:112960000-112965200 Weak transcription NHDF-Ad bronchial
40 chr1:112960000-112967600 Weak transcription Colonic Mucosa Colon
41 chr1:112960000-112968200 Weak transcription Fetal Muscle Leg muscle
42 chr1:112960000-112972200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:112960000-112972800 Weak transcription Left Ventricle heart
44 chr1:112960000-112973200 Weak transcription Ovary ovary
45 chr1:112960000-112974200 Weak transcription Placenta Amnion Placenta Amnion
46 chr1:112960000-112980800 Weak transcription Colon Smooth Muscle Colon
47 chr1:112960000-112981600 Weak transcription Liver Liver
48 chr1:112960000-112995200 Weak transcription Stomach Smooth Muscle stomach
49 chr1:112960000-112996800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr1:112960200-112965000 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015