The 2.0 version of rSNPBase

Variant report

Variant rs3762332
Chromosome Location chr1:113002480-113002481
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:112981400-113006000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr1:112988600-113004200 Weak transcription Fetal Heart heart
3 chr1:112988800-113008400 Weak transcription A549 lung
4 chr1:112989600-113004000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:112990000-113002800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:112990600-113004600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:112994600-113008800 Weak transcription Psoas Muscle Psoas
8 chr1:112994800-113008600 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr1:112995400-113003000 Strong transcription Duodenum Mucosa Duodenum
10 chr1:112995600-113002800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:112995800-113007000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:112999400-113002800 Weak transcription HepG2 liver
13 chr1:112999400-113003200 Weak transcription Stomach Mucosa stomach
14 chr1:112999400-113008000 Weak transcription Right Atrium heart
15 chr1:112999600-113005200 Weak transcription GM12878-XiMat blood
16 chr1:112999800-113004400 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr1:112999800-113008200 Weak transcription Primary monocytes fromperipheralblood blood
18 chr1:113000000-113003400 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr1:113000000-113004000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr1:113000000-113005000 Weak transcription Brain Anterior Caudate brain
21 chr1:113000000-113005600 Weak transcription Esophagus oesophagus
22 chr1:113000000-113006400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:113000000-113007800 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:113000000-113008400 Weak transcription Pancreas Pancrea
25 chr1:113000000-113008400 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:113000000-113008400 Weak transcription Dnd41 blood
27 chr1:113000200-113002600 Weak transcription Fetal Kidney kidney
28 chr1:113000200-113002800 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr1:113000200-113003400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:113000200-113004000 Weak transcription Gastric stomach
31 chr1:113000200-113004200 Weak transcription Fetal Intestine Small intestine
32 chr1:113000200-113005000 Weak transcription Liver Liver
33 chr1:113000200-113005600 Weak transcription H9 Cell Line embryonic stem cell
34 chr1:113000200-113007200 Weak transcription Spleen Spleen
35 chr1:113000200-113008200 Weak transcription Colon Smooth Muscle Colon
36 chr1:113000200-113008600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:113000200-113009600 Weak transcription Small Intestine intestine
38 chr1:113000400-113007800 Weak transcription Fetal Brain Male brain
39 chr1:113000400-113008200 Weak transcription Brain Germinal Matrix brain
40 chr1:113000600-113003200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr1:113000600-113003200 Weak transcription NHEK skin
42 chr1:113000600-113008400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:113000800-113002600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:113000800-113002600 Weak transcription NHDF-Ad bronchial
45 chr1:113000800-113004000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr1:113000800-113008200 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr1:113000800-113008400 Weak transcription Right Ventricle heart
48 chr1:113001000-113003400 Weak transcription Placenta Amnion Placenta Amnion
49 chr1:113001000-113007800 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr1:113001200-113008600 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015