The 2.0 version of rSNPBase

Variant report

Variant rs2492519
Chromosome Location chr1:112965608-112965609
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:112942400-112988200 Weak transcription Small Intestine intestine
2 chr1:112942600-112966400 Weak transcription Spleen Spleen
3 chr1:112942600-112967000 Weak transcription Pancreas Pancrea
4 chr1:112945000-112966400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:112946800-112970600 Weak transcription H9 Cell Line embryonic stem cell
6 chr1:112947200-112971200 Weak transcription Aorta Aorta
7 chr1:112947200-112981000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:112949200-112966400 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr1:112951200-112969000 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr1:112951600-112968800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:112952000-112969600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:112952400-112990600 Weak transcription Esophagus oesophagus
13 chr1:112952600-112981400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr1:112953800-112966400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:112954400-112967400 Strong transcription Osteobl bone
16 chr1:112957400-112986600 Weak transcription NHLF lung
17 chr1:112957600-112967400 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr1:112957600-112997600 Weak transcription Brain Anterior Caudate brain
19 chr1:112958200-112967600 Weak transcription Primary monocytes fromperipheralblood blood
20 chr1:112958600-112971000 Weak transcription Right Ventricle heart
21 chr1:112958600-112979000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:112959000-112965800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:112959600-112973200 Weak transcription Lung lung
24 chr1:112959600-112991600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr1:112959800-112972000 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr1:112959800-112973400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:112959800-112992800 Weak transcription Fetal Muscle Trunk muscle
28 chr1:112960000-112967600 Weak transcription Colonic Mucosa Colon
29 chr1:112960000-112968200 Weak transcription Fetal Muscle Leg muscle
30 chr1:112960000-112972200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:112960000-112972800 Weak transcription Left Ventricle heart
32 chr1:112960000-112973200 Weak transcription Ovary ovary
33 chr1:112960000-112974200 Weak transcription Placenta Amnion Placenta Amnion
34 chr1:112960000-112980800 Weak transcription Colon Smooth Muscle Colon
35 chr1:112960000-112981600 Weak transcription Liver Liver
36 chr1:112960000-112995200 Weak transcription Stomach Smooth Muscle stomach
37 chr1:112960000-112996800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr1:112960200-112966000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:112960200-112968000 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:112960200-112978200 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr1:112960200-112979000 Weak transcription GM12878-XiMat blood
42 chr1:112960200-112981200 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:112960200-112991600 Weak transcription Hela-S3 cervix
44 chr1:112960400-112966400 Weak transcription H1 Cell Line embryonic stem cell
45 chr1:112960400-112991400 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr1:112960600-112968000 Weak transcription Duodenum Mucosa Duodenum
47 chr1:112960600-112968200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:112961200-112995600 Weak transcription Brain Cingulate Gyrus brain
49 chr1:112961400-112979000 Weak transcription Brain Angular Gyrus brain
50 chr1:112961400-112980600 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015