The 2.0 version of rSNPBase

Variant report

Variant rs6696624
Chromosome Location chr1:112943183-112943184
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:112939800-112944200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:112939800-112944600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:112940000-112943800 Weak transcription Brain Substantia Nigra brain
4 chr1:112940000-112944000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:112940000-112944200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:112940000-112944600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:112940000-112945800 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:112940000-112950600 Weak transcription Lung lung
9 chr1:112940000-112952200 Weak transcription Esophagus oesophagus
10 chr1:112940000-112954400 Weak transcription Fetal Muscle Leg muscle
11 chr1:112940000-112956400 Weak transcription Left Ventricle heart
12 chr1:112940000-112961400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:112940200-112943600 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr1:112940200-112958400 Weak transcription Placenta Amnion Placenta Amnion
15 chr1:112940400-112944200 Weak transcription H1 Cell Line embryonic stem cell
16 chr1:112940400-112944200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr1:112940600-112943800 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr1:112940600-112943800 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr1:112940600-112945200 Weak transcription Colon Smooth Muscle Colon
20 chr1:112940600-112945400 Weak transcription Fetal Heart heart
21 chr1:112940600-112945800 Weak transcription Ovary ovary
22 chr1:112940600-112958800 Weak transcription Colonic Mucosa Colon
23 chr1:112940600-112962000 Weak transcription Psoas Muscle Psoas
24 chr1:112940800-112943800 Weak transcription Brain Angular Gyrus brain
25 chr1:112940800-112943800 Weak transcription Brain Cingulate Gyrus brain
26 chr1:112940800-112944200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr1:112940800-112946000 Weak transcription HepG2 liver
28 chr1:112940800-112946800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:112940800-112955000 Weak transcription Adipose Nuclei Adipose
30 chr1:112941000-112943800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:112941000-112943800 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr1:112941000-112943800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:112941000-112943800 Weak transcription A549 lung
34 chr1:112941000-112944600 Weak transcription HMEC breast
35 chr1:112941000-112946400 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr1:112941000-112946400 Weak transcription Aorta Aorta
37 chr1:112941000-112949000 Weak transcription Fetal Lung lung
38 chr1:112941000-112949000 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr1:112941200-112943600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr1:112941200-112943600 Weak transcription Osteobl bone
41 chr1:112941200-112943800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:112941200-112943800 Weak transcription Hela-S3 cervix
43 chr1:112941200-112943800 Weak transcription NH-A brain
44 chr1:112941200-112944000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr1:112941200-112946600 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr1:112941200-112949200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:112941200-112955000 Weak transcription Duodenum Mucosa Duodenum
48 chr1:112941200-112955000 Weak transcription Fetal Kidney kidney
49 chr1:112941400-112944000 Weak transcription HSMMtube muscle
50 chr1:112941400-112944200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015