Variant report

Variant	rs1448548
Chromosome Location	chr8:59856011-59856012
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:59855187..59857274-chr8:59861069..59862885,2	K562	blood:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10094258	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs10094753	1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10109969	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10110007	0.84[EUR][1000 genomes]
rs10113487	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10504274	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10957075	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12675853	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12681721	0.94[EUR][1000 genomes]
rs1349114	1.00[AFR][1000 genomes]
rs1868346	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1965199	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2168409	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs310367	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs365579	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs378104	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs399142	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs402443	0.89[CEU][hapmap];0.90[EUR][1000 genomes]
rs403090	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs410519	0.82[EUR][1000 genomes]
rs418520	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs439557	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs448699	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4737528	1.00[CEU][hapmap]
rs4738746	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4738748	0.81[AFR][1000 genomes]
rs4738749	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6471758	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6471760	1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6471761	0.94[EUR][1000 genomes]
rs6471763	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6471764	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6985104	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs6985410	1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6992490	1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7010342	1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7014584	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7016545	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7016794	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7841515	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs826595	0.88[CEU][hapmap];0.88[EUR][1000 genomes]

No data

Chromatin state (count:47 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59817800-59867800	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr8:59831200-59860200	Weak transcription	Gastric	stomach
3	chr8:59834000-59860400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr8:59837200-59858200	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr8:59839000-59860000	Weak transcription	Fetal Intestine Large	intestine
6	chr8:59839600-59857600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr8:59841000-59858000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr8:59841000-59859000	Weak transcription	Fetal Intestine Small	intestine
9	chr8:59841000-59861800	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr8:59843800-59863600	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr8:59847000-59857800	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr8:59847400-59858000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr8:59847600-59857400	Weak transcription	HUVEC	blood vessel
14	chr8:59847600-59860400	Weak transcription	Small Intestine	intestine
15	chr8:59847800-59860600	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr8:59849000-59858000	Weak transcription	Rectal Smooth Muscle	rectum
17	chr8:59849000-59861000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
18	chr8:59849800-59857800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr8:59850000-59858000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr8:59850800-59860600	Weak transcription	Primary T cells fromperipheralblood	blood
21	chr8:59851400-59878600	Weak transcription	Aorta	Aorta
22	chr8:59852000-59858400	Weak transcription	Colon Smooth Muscle	Colon
23	chr8:59852000-59861400	Weak transcription	HUES64 Cell Line	embryonic stem cell
24	chr8:59852000-59862600	Weak transcription	Rectal Mucosa Donor 29	rectum
25	chr8:59852000-59871200	Weak transcription	Duodenum Smooth Muscle	Duodenum
26	chr8:59852000-59875200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr8:59852000-59883400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
28	chr8:59852200-59856400	Weak transcription	Fetal Stomach	stomach
29	chr8:59852200-59858000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr8:59852200-59858000	Weak transcription	Osteobl	bone
31	chr8:59852200-59861200	Weak transcription	HUES48 Cell Line	embryonic stem cell
32	chr8:59852200-59861400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
33	chr8:59852200-59866800	Weak transcription	Duodenum Mucosa	Duodenum
34	chr8:59852200-59866800	Weak transcription	Thymus	Thymus
35	chr8:59852200-59871800	Weak transcription	Stomach Smooth Muscle	stomach
36	chr8:59852200-59874200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
37	chr8:59852400-59858000	Weak transcription	Cortex derived primary cultured neurospheres	brain
38	chr8:59852400-59875000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr8:59852400-59875600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
40	chr8:59852600-59856600	Weak transcription	Primary T cells from cord blood	blood
41	chr8:59852600-59861000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
42	chr8:59852600-59888600	Weak transcription	Primary hematopoietic stem cells	blood
43	chr8:59853400-59857400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr8:59855400-59858200	Strong transcription	Dnd41	blood
45	chr8:59855600-59859600	Strong transcription	Fetal Thymus	thymus
46	chr8:59855800-59858000	Weak transcription	Brain Germinal Matrix	brain
47	chr8:59856000-59860600	Enhancers	NHDF-Ad	bronchial

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