Variant report

Variant	rs4738746
Chromosome Location	chr8:59895927-59895928
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10094258	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs10094753	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs10109969	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10110007	0.82[EUR][1000 genomes]
rs10113487	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10504274	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10957075	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12675853	0.89[EUR][1000 genomes]
rs12681721	0.92[EUR][1000 genomes]
rs1448548	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1868346	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1965199	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2168409	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs310367	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs365579	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs378104	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs399142	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs402443	0.89[CEU][hapmap];0.92[EUR][1000 genomes]
rs403090	1.00[CEU][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs410519	0.84[EUR][1000 genomes]
rs418520	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs439557	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs448699	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4737528	1.00[CEU][hapmap]
rs4738748	0.81[AMR][1000 genomes]
rs4738749	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6471758	0.89[EUR][1000 genomes]
rs6471760	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs6471761	0.92[EUR][1000 genomes]
rs6471763	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6471764	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6985104	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs6985410	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs6992490	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs7010342	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs7014584	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7016545	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7016794	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7841515	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs826595	0.87[CEU][hapmap];0.90[EUR][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59887600-59903600	Weak transcription	Osteobl	bone
2	chr8:59888000-59899400	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr8:59888000-59903800	Weak transcription	Fetal Stomach	stomach
4	chr8:59889800-59899800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr8:59889800-59927000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr8:59890400-59903200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr8:59891000-59916600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr8:59891200-59903800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr8:59891200-59918000	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr8:59891600-59900800	Weak transcription	Primary hematopoietic stem cells	blood
11	chr8:59891600-59903800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr8:59891800-59904200	Weak transcription	Fetal Intestine Small	intestine
13	chr8:59892400-59898800	Weak transcription	Dnd41	blood
14	chr8:59892800-59896200	Enhancers	Primary T cells from cord blood	blood
15	chr8:59893200-59896400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
16	chr8:59893600-59896000	Enhancers	Thymus	Thymus
17	chr8:59894000-59896000	Enhancers	Fetal Thymus	thymus
18	chr8:59894200-59896200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
19	chr8:59894800-59913600	Weak transcription	Small Intestine	intestine
20	chr8:59895000-59896000	Enhancers	NHDF-Ad	bronchial
21	chr8:59895400-59896200	Enhancers	Pancreatic Islets	Pancreatic Islet
22	chr8:59895800-59896000	Enhancers	Primary T cells fromperipheralblood	blood
23	chr8:59895800-59896000	Enhancers	Primary T helper naive cells from peripheral blood	blood
24	chr8:59895800-59896000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
25	chr8:59895800-59899400	Weak transcription	H9 Cell Line	embryonic stem cell
26	chr8:59895800-59903200	Weak transcription	Primary T killer memory cells from peripheral blood	blood

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