Variant report

Variant	rs1608043
Chromosome Location	chr6:109595608-109595609
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:109594298..109596125-chr6:109602003..109604436,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1008083	0.95[YRI][hapmap];0.81[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs1105155	0.90[ASW][hapmap]
rs13209277	0.83[YRI][hapmap]
rs55863350	0.88[AFR][1000 genomes]
rs61002917	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs6568562	1.00[ASW][hapmap];0.96[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs6568565	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs6909900	1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs6924768	0.91[ASW][hapmap];0.96[LWK][hapmap];0.81[MKK][hapmap];0.87[YRI][hapmap];0.81[AFR][1000 genomes]
rs73512467	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73518692	0.85[AFR][1000 genomes]
rs73762681	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7753882	1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs7754671	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs7762891	0.95[YRI][hapmap];0.83[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs7773100	1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs9480917	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs9480925	0.91[ASW][hapmap];0.89[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs9487018	0.82[YRI][hapmap]
rs9487019	0.95[YRI][hapmap]
rs9487029	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9487030	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9487031	0.95[YRI][hapmap]
rs9487035	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs9487044	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs9487045	0.89[AMR][1000 genomes]
rs9487050	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs9487056	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs9487059	1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs949883	1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.89[AMR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:109587600-109614600	Weak transcription	HepG2	liver
2	chr6:109591600-109615200	Weak transcription	Placenta	Placenta
3	chr6:109595200-109595800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr6:109595400-109595800	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr6:109595600-109596000	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr6:109595600-109596000	Enhancers	iPS-15b Cell Line	embryonic stem cell

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