The 2.0 version of rSNPBase

Variant report

Variant rs16849571
Chromosome Location chr1:176085550-176085551
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:176048800-176107000 Weak transcription HepG2 liver
2 chr1:176054400-176131600 Weak transcription NH-A brain
3 chr1:176055000-176141600 Weak transcription Hela-S3 cervix
4 chr1:176065600-176154800 Weak transcription Aorta Aorta
5 chr1:176068600-176087600 Weak transcription NHLF lung
6 chr1:176069000-176090200 Weak transcription Fetal Kidney kidney
7 chr1:176069000-176116400 Weak transcription Brain Cingulate Gyrus brain
8 chr1:176069000-176139200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:176069200-176087200 Weak transcription Right Ventricle heart
10 chr1:176069200-176123200 Weak transcription Osteobl bone
11 chr1:176069200-176126600 Weak transcription HMEC breast
12 chr1:176069200-176138800 Weak transcription HUVEC blood vessel
13 chr1:176069400-176121200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:176070200-176087600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr1:176070400-176087400 Weak transcription Brain Substantia Nigra brain
16 chr1:176070400-176087600 Weak transcription Spleen Spleen
17 chr1:176070400-176091600 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:176070400-176097800 Weak transcription A549 lung
19 chr1:176070400-176107400 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr1:176070400-176126400 Weak transcription Brain Anterior Caudate brain
21 chr1:176070400-176151400 Weak transcription Pancreas Pancrea
22 chr1:176070600-176087800 Weak transcription Stomach Smooth Muscle stomach
23 chr1:176070800-176102200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr1:176070800-176102600 Weak transcription Brain Hippocampus Middle brain
25 chr1:176070800-176110600 Weak transcription Small Intestine intestine
26 chr1:176071000-176091600 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr1:176071600-176086000 Strong transcription Primary B cells from cord blood blood
28 chr1:176071600-176088600 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr1:176071600-176117800 Weak transcription Gastric stomach
30 chr1:176072000-176140600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:176072400-176087600 Weak transcription Fetal Muscle Leg muscle
32 chr1:176072400-176108600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr1:176072600-176107400 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr1:176072800-176114600 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:176072800-176114800 Weak transcription NHDF-Ad bronchial
36 chr1:176072800-176126600 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr1:176076200-176086000 Weak transcription Fetal Brain Female brain
38 chr1:176076200-176088800 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr1:176076200-176102000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:176076200-176126000 Weak transcription Ovary ovary
41 chr1:176076200-176127800 Weak transcription Esophagus oesophagus
42 chr1:176078600-176086400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr1:176079000-176085800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr1:176079200-176086400 Strong transcription Primary monocytes fromperipheralblood blood
45 chr1:176079400-176085800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:176079800-176088400 Weak transcription HSMMtube muscle
47 chr1:176079800-176105400 Weak transcription Colon Smooth Muscle Colon
48 chr1:176080000-176103400 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr1:176080400-176086000 Strong transcription Primary B cells from peripheral blood blood
50 chr1:176080400-176087800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015