The 2.0 version of rSNPBase

Variant report

Variant rs11809835
Chromosome Location chr1:176142890-176142891
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:176065600-176154800 Weak transcription Aorta Aorta
2 chr1:176070400-176151400 Weak transcription Pancreas Pancrea
3 chr1:176100800-176153200 Weak transcription Colonic Mucosa Colon
4 chr1:176110600-176164000 Weak transcription NHLF lung
5 chr1:176116000-176146200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:176123800-176144200 Weak transcription Left Ventricle heart
7 chr1:176123800-176150000 Weak transcription Osteobl bone
8 chr1:176126400-176168800 Weak transcription Small Intestine intestine
9 chr1:176127000-176147000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr1:176127000-176174000 Weak transcription Colon Smooth Muscle Colon
11 chr1:176127200-176153400 Weak transcription Brain Inferior Temporal Lobe brain
12 chr1:176127400-176143200 Weak transcription Brain Substantia Nigra brain
13 chr1:176127400-176144200 Weak transcription A549 lung
14 chr1:176127400-176153400 Weak transcription Stomach Smooth Muscle stomach
15 chr1:176127400-176155400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:176128000-176144200 Weak transcription Gastric stomach
17 chr1:176128000-176147000 Weak transcription Stomach Mucosa stomach
18 chr1:176128000-176157800 Weak transcription Spleen Spleen
19 chr1:176128000-176175200 Weak transcription Esophagus oesophagus
20 chr1:176128400-176154600 Weak transcription Rectal Smooth Muscle rectum
21 chr1:176128600-176147000 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr1:176128600-176147200 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr1:176128600-176155600 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr1:176128800-176152800 Weak transcription Brain Cingulate Gyrus brain
25 chr1:176128800-176152800 Weak transcription Placenta Amnion Placenta Amnion
26 chr1:176128800-176154200 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:176130400-176143200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:176131000-176143400 Weak transcription NHDF-Ad bronchial
29 chr1:176131000-176144000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:176131800-176143600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr1:176132200-176154200 Weak transcription NH-A brain
32 chr1:176132400-176143400 Weak transcription NHEK skin
33 chr1:176134400-176152800 Weak transcription Brain Angular Gyrus brain
34 chr1:176135200-176144600 Weak transcription H9 Cell Line embryonic stem cell
35 chr1:176136200-176147400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:176137400-176173000 Weak transcription Right Ventricle heart
37 chr1:176138200-176155800 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr1:176138600-176143000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:176138600-176146200 Strong transcription Primary monocytes fromperipheralblood blood
40 chr1:176138800-176143000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:176138800-176143000 Strong transcription Primary T helper naive cells from peripheral blood blood
42 chr1:176138800-176143000 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr1:176138800-176143200 Strong transcription Fetal Intestine Large intestine
44 chr1:176138800-176144800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
45 chr1:176138800-176145400 Strong transcription Primary neutrophils fromperipheralblood blood
46 chr1:176138800-176146000 Strong transcription Liver Liver
47 chr1:176138800-176146200 Strong transcription Primary T cells fromperipheralblood blood
48 chr1:176138800-176155400 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr1:176139000-176143400 Strong transcription Primary T helper cells PMA-I stimulated --
50 chr1:176139000-176145400 Strong transcription Fetal Thymus thymus

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Last update: Aug 31, 2015