The 2.0 version of rSNPBase

Variant report

Variant rs57395528
Chromosome Location chr1:176164142-176164143
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:176126400-176168800 Weak transcription Small Intestine intestine
2 chr1:176127000-176174000 Weak transcription Colon Smooth Muscle Colon
3 chr1:176128000-176175200 Weak transcription Esophagus oesophagus
4 chr1:176137400-176173000 Weak transcription Right Ventricle heart
5 chr1:176140000-176168200 Weak transcription Psoas Muscle Psoas
6 chr1:176143000-176165800 Weak transcription Lung lung
7 chr1:176144000-176172800 Weak transcription HMEC breast
8 chr1:176144400-176170800 Weak transcription K562 blood
9 chr1:176144400-176173400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:176144600-176168600 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:176144800-176164600 Weak transcription NHDF-Ad bronchial
12 chr1:176144800-176172800 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr1:176145000-176173200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr1:176146000-176171400 Weak transcription Left Ventricle heart
15 chr1:176146000-176173000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:176150600-176173000 Weak transcription Hela-S3 cervix
17 chr1:176151800-176173000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr1:176152000-176168800 Weak transcription Primary B cells from cord blood blood
19 chr1:176152000-176168800 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr1:176152000-176173000 Weak transcription Thymus Thymus
21 chr1:176153200-176165800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:176153200-176173000 Weak transcription Primary hematopoietic stem cells blood
23 chr1:176153600-176169600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:176153600-176173000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:176153600-176173000 Weak transcription HSMM muscle
26 chr1:176153800-176166200 Weak transcription Dnd41 blood
27 chr1:176156000-176172600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr1:176157800-176167200 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr1:176158000-176166200 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr1:176160200-176164800 Enhancers Monocytes-CD14+_RO01746 blood
31 chr1:176161200-176167600 Enhancers Primary T helper cells fromperipheralblood blood
32 chr1:176161600-176173800 Weak transcription HUVEC blood vessel
33 chr1:176161800-176169600 Weak transcription Primary T cells from cord blood blood
34 chr1:176161800-176172400 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr1:176162400-176164800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr1:176162400-176166200 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr1:176162600-176164600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr1:176162600-176164800 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr1:176162600-176165800 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr1:176163000-176173400 Weak transcription Fetal Thymus thymus
41 chr1:176163400-176164400 Enhancers Primary monocytes fromperipheralblood blood
42 chr1:176163400-176164800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:176163600-176164200 Enhancers Primary T cells fromperipheralblood blood
44 chr1:176163600-176173000 Enhancers Primary T helper cells PMA-I stimulated --
45 chr1:176163800-176166800 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr1:176164000-176164200 Enhancers Brain Germinal Matrix brain
47 chr1:176164000-176164200 Enhancers Right Atrium heart
48 chr1:176164000-176168400 Weak transcription Primary neutrophils fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015