The 2.0 version of rSNPBase

Variant report

Variant rs58305404
Chromosome Location chr1:176150433-176150434
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:176065600-176154800 Weak transcription Aorta Aorta
2 chr1:176070400-176151400 Weak transcription Pancreas Pancrea
3 chr1:176100800-176153200 Weak transcription Colonic Mucosa Colon
4 chr1:176110600-176164000 Weak transcription NHLF lung
5 chr1:176126400-176168800 Weak transcription Small Intestine intestine
6 chr1:176127000-176174000 Weak transcription Colon Smooth Muscle Colon
7 chr1:176127200-176153400 Weak transcription Brain Inferior Temporal Lobe brain
8 chr1:176127400-176153400 Weak transcription Stomach Smooth Muscle stomach
9 chr1:176127400-176155400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr1:176128000-176157800 Weak transcription Spleen Spleen
11 chr1:176128000-176175200 Weak transcription Esophagus oesophagus
12 chr1:176128400-176154600 Weak transcription Rectal Smooth Muscle rectum
13 chr1:176128600-176155600 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr1:176128800-176152800 Weak transcription Brain Cingulate Gyrus brain
15 chr1:176128800-176152800 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:176128800-176154200 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:176132200-176154200 Weak transcription NH-A brain
18 chr1:176134400-176152800 Weak transcription Brain Angular Gyrus brain
19 chr1:176137400-176173000 Weak transcription Right Ventricle heart
20 chr1:176138200-176155800 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr1:176138800-176155400 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr1:176139000-176153800 Strong transcription Dnd41 blood
23 chr1:176139800-176152600 Weak transcription Brain Anterior Caudate brain
24 chr1:176140000-176155800 Weak transcription Fetal Brain Female brain
25 chr1:176140000-176157800 Weak transcription H1 Cell Line embryonic stem cell
26 chr1:176140000-176168200 Weak transcription Psoas Muscle Psoas
27 chr1:176140200-176152200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:176140800-176153600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:176140800-176155800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr1:176142200-176153400 Weak transcription Fetal Heart heart
31 chr1:176142200-176154400 Weak transcription Fetal Kidney kidney
32 chr1:176142800-176157800 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr1:176142800-176162200 Weak transcription HepG2 liver
34 chr1:176143000-176150600 Weak transcription Fetal Intestine Small intestine
35 chr1:176143000-176150600 Weak transcription Thymus Thymus
36 chr1:176143000-176151200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:176143000-176153000 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr1:176143000-176165800 Weak transcription Lung lung
39 chr1:176143600-176152400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:176143800-176153200 Weak transcription HSMMtube muscle
41 chr1:176144000-176172800 Weak transcription HMEC breast
42 chr1:176144200-176155600 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr1:176144400-176152200 Weak transcription NHEK skin
44 chr1:176144400-176158200 Weak transcription Muscle Satellite Cultured Cells --
45 chr1:176144400-176170800 Weak transcription K562 blood
46 chr1:176144400-176173400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr1:176144600-176151200 Weak transcription Fetal Lung lung
48 chr1:176144600-176168600 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr1:176144800-176151400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr1:176144800-176151400 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015