The 2.0 version of rSNPBase

Variant report

Variant rs58178699
Chromosome Location chr1:176112850-176112851
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:176054400-176131600 Weak transcription NH-A brain
2 chr1:176055000-176141600 Weak transcription Hela-S3 cervix
3 chr1:176065600-176154800 Weak transcription Aorta Aorta
4 chr1:176069000-176116400 Weak transcription Brain Cingulate Gyrus brain
5 chr1:176069000-176139200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:176069200-176123200 Weak transcription Osteobl bone
7 chr1:176069200-176126600 Weak transcription HMEC breast
8 chr1:176069200-176138800 Weak transcription HUVEC blood vessel
9 chr1:176069400-176121200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:176070400-176126400 Weak transcription Brain Anterior Caudate brain
11 chr1:176070400-176151400 Weak transcription Pancreas Pancrea
12 chr1:176071600-176117800 Weak transcription Gastric stomach
13 chr1:176072000-176140600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:176072800-176114600 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr1:176072800-176114800 Weak transcription NHDF-Ad bronchial
16 chr1:176072800-176126600 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr1:176076200-176126000 Weak transcription Ovary ovary
18 chr1:176076200-176127800 Weak transcription Esophagus oesophagus
19 chr1:176081200-176114800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr1:176083000-176126000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:176085400-176142400 Weak transcription Lung lung
22 chr1:176085600-176116400 Weak transcription Adipose Nuclei Adipose
23 chr1:176085600-176122200 Weak transcription Left Ventricle heart
24 chr1:176085600-176122600 Weak transcription Thymus Thymus
25 chr1:176085600-176126000 Weak transcription Fetal Stomach stomach
26 chr1:176085600-176128600 Weak transcription Placenta Placenta
27 chr1:176086000-176113000 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr1:176086000-176114800 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr1:176087400-176122800 Weak transcription NHEK skin
30 chr1:176088600-176122800 Weak transcription Rectal Smooth Muscle rectum
31 chr1:176090800-176126600 Weak transcription Fetal Brain Male brain
32 chr1:176091600-176117000 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr1:176092800-176114800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:176093200-176119200 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr1:176093200-176121200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr1:176094800-176126200 Weak transcription Fetal Brain Female brain
37 chr1:176094800-176126400 Weak transcription Fetal Muscle Leg muscle
38 chr1:176095400-176113400 Weak transcription Fetal Muscle Trunk muscle
39 chr1:176095400-176114800 Weak transcription Fetal Kidney kidney
40 chr1:176095600-176130200 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr1:176096000-176115400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:176096000-176138800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:176100400-176126400 Weak transcription Stomach Smooth Muscle stomach
44 chr1:176100800-176153200 Weak transcription Colonic Mucosa Colon
45 chr1:176101400-176126600 Weak transcription Brain Substantia Nigra brain
46 chr1:176101600-176114600 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:176102800-176114600 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr1:176102800-176115000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:176102800-176116800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:176102800-176121000 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015