The 2.0 version of rSNPBase

Variant report

Variant rs59373738
Chromosome Location chr1:176081845-176081846
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:176046600-176082200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr1:176048800-176107000 Weak transcription HepG2 liver
3 chr1:176054400-176131600 Weak transcription NH-A brain
4 chr1:176055000-176141600 Weak transcription Hela-S3 cervix
5 chr1:176065600-176154800 Weak transcription Aorta Aorta
6 chr1:176068600-176087600 Weak transcription NHLF lung
7 chr1:176069000-176090200 Weak transcription Fetal Kidney kidney
8 chr1:176069000-176116400 Weak transcription Brain Cingulate Gyrus brain
9 chr1:176069000-176139200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:176069200-176082400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:176069200-176084400 Weak transcription Psoas Muscle Psoas
12 chr1:176069200-176087200 Weak transcription Right Ventricle heart
13 chr1:176069200-176123200 Weak transcription Osteobl bone
14 chr1:176069200-176126600 Weak transcription HMEC breast
15 chr1:176069200-176138800 Weak transcription HUVEC blood vessel
16 chr1:176069400-176121200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:176070200-176087600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr1:176070400-176082400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr1:176070400-176082800 Weak transcription K562 blood
20 chr1:176070400-176083200 Weak transcription Colonic Mucosa Colon
21 chr1:176070400-176083200 Weak transcription Rectal Smooth Muscle rectum
22 chr1:176070400-176084600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr1:176070400-176087400 Weak transcription Brain Substantia Nigra brain
24 chr1:176070400-176087600 Weak transcription Spleen Spleen
25 chr1:176070400-176091600 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr1:176070400-176097800 Weak transcription A549 lung
27 chr1:176070400-176107400 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr1:176070400-176126400 Weak transcription Brain Anterior Caudate brain
29 chr1:176070400-176151400 Weak transcription Pancreas Pancrea
30 chr1:176070600-176082200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:176070600-176087800 Weak transcription Stomach Smooth Muscle stomach
32 chr1:176070800-176102200 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr1:176070800-176102600 Weak transcription Brain Hippocampus Middle brain
34 chr1:176070800-176110600 Weak transcription Small Intestine intestine
35 chr1:176071000-176082800 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr1:176071000-176082800 Weak transcription Fetal Lung lung
37 chr1:176071000-176085200 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:176071000-176091600 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr1:176071600-176086000 Strong transcription Primary B cells from cord blood blood
40 chr1:176071600-176088600 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr1:176071600-176117800 Weak transcription Gastric stomach
42 chr1:176072000-176140600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr1:176072400-176084400 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr1:176072400-176087600 Weak transcription Fetal Muscle Leg muscle
45 chr1:176072400-176108600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr1:176072600-176085000 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr1:176072600-176107400 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr1:176072800-176085000 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr1:176072800-176114600 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr1:176072800-176114800 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015