The 2.0 version of rSNPBase

Variant report

Variant rs16868665
Chromosome Location chr5:16476579-16476580
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16466800-16477400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr5:16467000-16476600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr5:16467400-16478000 Weak transcription Fetal Muscle Trunk muscle
4 chr5:16467600-16479200 Weak transcription Primary B cells from cord blood blood
5 chr5:16468000-16477000 Weak transcription Primary hematopoietic stem cells blood
6 chr5:16468000-16481800 Weak transcription Fetal Thymus thymus
7 chr5:16468200-16476800 Weak transcription Brain Substantia Nigra brain
8 chr5:16468200-16477800 Weak transcription Brain Anterior Caudate brain
9 chr5:16468200-16480200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr5:16468200-16480600 Weak transcription Fetal Intestine Small intestine
11 chr5:16468200-16481000 Weak transcription Brain Hippocampus Middle brain
12 chr5:16468200-16481600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr5:16468200-16482000 Weak transcription Primary T cells fromperipheralblood blood
14 chr5:16468200-16483200 Weak transcription A549 lung
15 chr5:16468200-16483400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr5:16468200-16484000 Weak transcription Small Intestine intestine
17 chr5:16468200-16485000 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr5:16468200-16487400 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr5:16468200-16489600 Weak transcription Brain Cingulate Gyrus brain
20 chr5:16468200-16490800 Weak transcription Right Ventricle heart
21 chr5:16468400-16477200 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr5:16468400-16480800 Weak transcription HSMM muscle
23 chr5:16468400-16481000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr5:16468400-16493000 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr5:16468600-16481000 Weak transcription NHDF-Ad bronchial
26 chr5:16468600-16481000 Weak transcription NHEK skin
27 chr5:16468800-16479800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr5:16468800-16481200 Weak transcription HMEC breast
29 chr5:16469400-16476800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr5:16469400-16477400 Weak transcription K562 blood
31 chr5:16469800-16480800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr5:16469800-16489800 Weak transcription Brain Inferior Temporal Lobe brain
33 chr5:16470000-16486800 Weak transcription Brain Angular Gyrus brain
34 chr5:16470000-16486800 Weak transcription Gastric stomach
35 chr5:16470000-16486800 Weak transcription Pancreas Pancrea
36 chr5:16470000-16486800 Weak transcription Psoas Muscle Psoas
37 chr5:16470000-16490200 Weak transcription Fetal Muscle Leg muscle
38 chr5:16470400-16489000 Weak transcription Fetal Brain Male brain
39 chr5:16470800-16478400 Weak transcription Brain Germinal Matrix brain
40 chr5:16472200-16477000 Weak transcription GM12878-XiMat blood
41 chr5:16472800-16483400 Strong transcription Skeletal Muscle Female skeletal muscle
42 chr5:16474000-16478200 Strong transcription Liver Liver
43 chr5:16474800-16477800 Strong transcription Skeletal Muscle Male skeletal muscle
44 chr5:16474800-16478200 Strong transcription Primary T cells from cord blood blood
45 chr5:16475000-16476800 Strong transcription Duodenum Mucosa Duodenum
46 chr5:16475000-16477600 Strong transcription Primary T helper cells PMA-I stimulated --
47 chr5:16475200-16476800 Weak transcription Fetal Intestine Large intestine
48 chr5:16475200-16478200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr5:16475400-16476600 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr5:16475400-16476600 Weak transcription Left Ventricle heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015